※ dbPPT Protein Information

TagContent
UniProt Accession
Theoretical PI
8.08 
Molecular Weight
142116.54 
Genbank Protein ID
Genbank Nucleotide ID
Protein Name
DNA-directed RNA polymerase 
Gene Name
OsJ_26208 
Created Date
2007-03-20 
Organism
Oryza sativa subsp. japonica(Rice) 
NCBI Taxa ID
39947 
Phosphorylation Sites
Position
Peptide
Source
References
72
VDLRAIPSLKDGGHT
dbPPT, P3DB
[1, 2]
Functional Description
 
Sequence Annotation
Keyword
DNA-directed RNA polymerase,Nucleotidyltransferase,Transcription,Transferase 
Sequence Source
UniProt 
Protein Sequence
MWDEKERPRV FCLAPQDGEA VWWLAMEDPE ITGQQSPNAT SIVTDLMDLD DIIVEGNEVQ 60
FAMDVDLRAI PSLKDGGHTD PLVQIPGDMS HMDVDLRVIP SLKDGGHADP PVQVPVDKRI 120
ASLEKLCKEA SRSFFRETRL VSHQINSYND FVSHGLQKMF DSLDEVTVEP DYDPSKKVGP 180
WRHATIKFGR VELEEPVFWV DNCDLDVETL KLKPKHARLQ KMTYSSKMKV EMTVQVYSLH 240
KSDKAKTGED PYIQRKDIMK ETKWVTIGKL PVMESECEYD FGGYFLIKGM EKVFVAEEQR 300
CLSRIWINDS PTWEACYQRS QIRREKISIK PVQSNDGFRK VINLYFLGAT IPIWIMFFAL 360
GVSSDKEAFD IIDIQECDAS MANIISATIT ESHEQCEGFQ REGRASEYID KLIRNTKFPP 420
KGSFDEYIGR HMFPDVSGNR SKALFLGYMV RCLLLASSGN RKSDNRDDFR NKRLDLACEL 480
LQRELWVHIM HAQKRMVKVM QRHLSGDGDL QPLECYVHAS IVTNGLNRAF STGSWCHPFN 540
KRERCSGIVA TLRRTNPLQM MSDMRKTRQW VAYAGKAGDA RYPNPSYWGK LCFLSTPDGE 600
KCGFVKNLAI TAIVSCLARE PSVDALVSCG MKKLDELLLQ EISGKDRIFL NGNLVGVCAD 660
SVEFVLHLRS MRRRKQIDAQ VEIKRDKQNK EVRIFSDPGR ILRPLLIVEN LRNIMNRKNG 720
SYSFQELMDQ NIIELIGVEE EEDIRCAYGI RHLFAGDEEK NFSFYTHCEL DPSFLLGLSC 780
SIIPFANHDT AKRILMQAEK ISQQAIGYST TNPLFRVDTH SHQLYYPQRP LFKTVAADCL 840
GKRDYTSGSK HDFARPEYFN GQNAIVSISV HQGFNQEDSL VLNRASLERG MFRTQHFKSY 900
KALIENKEIT KRLKHKENIN FGKTPSKKGL VDSLDIDGLP YIGASLQSND IIIGKVSDSG 960
EDHSIKLLHT EKGIVEKVVL SATDDGTNSA FVTLRQTRSP RIGDKFASMH GQKGVIGFLD 1020
SQENFPFTHQ GIVPDIVINP HGFPTRQTPG QLLEAALGKG IALGGATRYA TPFTSPSVEV 1080
ITEQLHKAGF SRWGGESVIN GRTGERAASP VFTGPTFYQR LHHMAEDKVK FRNTGPVHPL 1140
TRQPVEDRRR YGGVKFGEME RDCLLAHGAA ANLHERLFLL SDVSRLHVCR RCQRAAVVVS 1200
PAVAADGGGG RKVRGPYCRF CRSAEEVVRV SVPYGAKILY QELFSMGICL KFDTELI 1257 
Gene Ontology
GO:0003677; F: DNA binding; IEA: InterPro
GO:0003899; F: DNA-directed RNA polymerase activity; IEA: UniProtKB-KW
GO:0032549; F: ribonucleoside binding; IEA: InterPro
GO:0006351; P: transcription, DNA-templated; IEA: InterPro 
Interpro
InterPro; IPR015712; DNA-dir_RNA_pol_su2
InterPro; IPR007120; DNA-dir_RNA_pol_su2_6
InterPro; IPR007121; RNA_pol_bsu_CS
InterPro; IPR007644; RNA_pol_bsu_protrusion
InterPro; IPR007642; RNA_pol_Rpb2_2
InterPro; IPR007645; RNA_pol_Rpb2_3
InterPro; IPR007646; RNA_pol_Rpb2_4
InterPro; IPR007647; RNA_pol_Rpb2_5
InterPro; IPR007641; RNA_pol_Rpb2_7
InterPro; IPR014724; RNA_pol_RPB2_OB-fold
Pfam
Pfam; PF04563; RNA_pol_Rpb2_1
Pfam; PF04561; RNA_pol_Rpb2_2
Pfam; PF04565; RNA_pol_Rpb2_3
Pfam; PF04566; RNA_pol_Rpb2_4
Pfam; PF04567; RNA_pol_Rpb2_5
Pfam; PF00562; RNA_pol_Rpb2_6
Pfam; PF04560; RNA_pol_Rpb2_7 
SMART
 
PROSITE
PS01166; RNA_POL_BETA 
PRINTS