※ dbPPT Protein Information

TagContent
UniProt Accession
Theoretical PI
5.77 
Molecular Weight
221770.86 
Genbank Protein ID
Genbank Nucleotide ID
Protein Name
DNA-directed RNA polymerase 
Gene Name
OsJ_05410 
Created Date
2009-03-24 
Organism
Oryza sativa subsp. japonica(Rice) 
NCBI Taxa ID
39947 
Phosphorylation Sites
Position
Peptide
Source
References
1573
SDTKQSDSWDGWKSA
dbPPT, P3DB
[1, 2]
Functional Description
 
Sequence Annotation
Keyword
DNA-directed RNA polymerase,Nucleotidyltransferase,Transcription,Transferase 
Sequence Source
UniProt 
Protein Sequence
MEEDQSAIPV AEGAIKSIKL SLSTEDEIRT YSINDCPVTH PSQLGNPFLG LPLETGKCES 60
CGASENGKCE GHFGYIELPV PIYHPCHVTE LRQILNVVCL KCLRVKKGKV KQTEGKDNTS 120
ALSCYYCRDL PALSLKEIKT ADGAFRLELK MPPRKFMTEG SWNFLDKYGF HHGGTSHCRT 180
LLPEEALNIL KKIPEETKRK LAARGYIAQS GYVMKYLPVP PNCLYIPEFT DGQSIMSYDI 240
SISLLKKVLQ KIEQIKKSRA GSPNFESHEV ESCDLQLSIA QYIHLRGTTR GPQDNTKRFA 300
ISTDPSALST KQWLEKMRTL FISKGSGFSS RSVLTGDPYI GVDVIGLPSE VAKRITFEEQ 360
VTDINLNRLQ EIVDKGLCLT YRDGQATYAI TVGSKGHTTL KVGQTISRRI VDGDVVFLNR 420
PPSTHKHSLQ AFRVYVHEDH TVKINPLICA PFAADFDGDC VHIYYPQSLA AKAEALELFS 480
VEKQLTSSHS GKVNLQLVSD SLLALKHMSS RTMLSKEAAN QLAMLVTCSL PDPAVIKSKP 540
YWTISQIVQG ALPKALTSQG DKHVVRDSTI IKLDLDKESV QTSFSDLVYS TLSVKGPGEA 600
LQFLNVLQPL LMELILLDGF SVSLQDFNVP KVLLEEAQKN IEKQSLILEQ SRFAENQVVE 660
MRVDNNLKDI KQQISDFVVK RSHLGLLIDP KSDSSVSKVV QQLGFVGLQL YREGKFYSRR 720
LVEDCYYTFV NKHPAVREEH SPEAYGLVRS SYFHGLNPYE ELVHAISTRE AIVRSSRGLT 780
EPGTLFKNLM ALLRDVVICY DGTVRNVCSK SIIQLNYTED DALDFPSAIG PGEPVGVLAA 840
TAISNPAYKA VLDASQSNNT SWERMKEILQ TTSRYKNDMK DRKVILFLND CSCAKKFCKE 900
KAAIAVQGCL RRITLEDCAT DICIEDGNWA APAGFQHPVP PPQCKILPVP IPIPAHGSVK 960
FPPVPIPAPE HLKYNIHVVR YQKQIGLDGT SEAAPALVGH IHLDRAHLER INISTEDILQ 1020
KCQEVSGKYG KKKGHLSNLF KNITFSTCDC LFTQKLVDGK LPKLPCLQFF VSDNMIVSES 1080
VERAVSVLAD SLCGVLLNTI IKGDPRIQEA KIVWVGSDAT SWVKNTQKAS KGEPAVEIIV 1140
EEEEALHIGD AWRTTMDACI PVLNLIDIRR SIPYGIQQVR ELLGISCAFD QVVQRLSTTV 1200
RMVAKDVLKD HLVLVANSMT FTGNLNGFNN AGYKATFRSL KVQVPFTEST LITPMKCFEK 1260
AAEKCHSDSL GCVVSSCSWG KHAASGTGSS FQILWNESQL KSNKEYGDGL YDYLALVRTD 1320
EEKARYTFFD DVDYLAEENE ADVCLSPELD GTIGQPIFDD NLEEQDVQNN SSWDNGTTTN 1380
ASWEQNGSAG NDSDKWGGWN DAAAGADTGV TKPANQGNSC WDVPATVEKS SSDWGGWGTE 1440
KAKEKEKISE EPAQHDAWSV QGPKRATDGG ASWKKQSSTQ NDGNSWKENK GRGSNGGSWE 1500
KDNAQKGSWG RGNDEAENNN DVQNKSWETV AADAHASTEK SWGNVTASPS DNAWSAAPVS 1560
QGNGSSDTKQ SDSWDGWKSA GVDKAINKDK ESLGNVPASP SFSAWNASPV SQGNERSDAK 1620
QSDSWDGWKS AGVDKAINKD KESLGNVPAS PSFSAWNAAP VSQGNERLDA KQSDSWDGWK 1680
SAGVDDSVKD KESWGNVPAS PSDSAWNAAP VSQGNESSDA KQSDSWDGWK SAGVDASTNK 1740
DKESWGNVPA SPSDSAWNAA PVSQGDDVWN SAEANESRNK DWKSDGWGAR GGNWRGQRNN 1800
PGRPPRKPDG RGLPRRPDER GPPRRHFDLT AEEEKILGEI EPTVLSIRKI FRESIDSIKL 1860
SPEDEKFIKE NVLEHHPEKQ SKVSGEIDHI MVDKHQVFQD SRCLFVVSSD GTRSDFSYLK 1920
CMENFVRKTY PEHGDSFCKK YFKRRRDQPP AADGGTAPGT PAGATQSTAV DTQEGTSQQT 1980
QPDIATAPAA TQQETLQDTP APPADDGLLG KGPSPSD 2017 
Gene Ontology
GO:0000418; C: DNA-directed RNA polymerase IV complex; IEA: EnsemblPlants/Gramene
GO:0000419; C: DNA-directed RNA polymerase V complex; IEA: EnsemblPlants/Gramene
GO:0016604; C: nuclear body; IEA: EnsemblPlants/Gramene
GO:0005507; F: copper ion binding; IEA: InterPro
GO:0003677; F: DNA binding; IEA: InterPro
GO:0003899; F: DNA-directed RNA polymerase activity; IEA: UniProtKB-KW
GO:0048038; F: quinone binding; IEA: InterPro
GO:0009308; P: amine metabolic process; IEA: InterPro
GO:0006306; P: DNA methylation; IEA: EnsemblPlants/Gramene
GO:0030422; P: production of siRNA involved in RNA interference; IEA: EnsemblPlants/Gramene
GO:0006351; P: transcription, DNA-templated; IEA: InterPro 
Interpro
InterPro; IPR015801; Cu_amine_oxidase_N2/3
InterPro; IPR021602; DUF3223
InterPro; IPR000722; RNA_pol_asu
InterPro; IPR006592; RNA_pol_N
InterPro; IPR007080; RNA_pol_Rpb1_1
InterPro; IPR007066; RNA_pol_Rpb1_3
InterPro; IPR007081; RNA_pol_Rpb1_5
Pfam
Pfam; PF11523; DUF3223
Pfam; PF04997; RNA_pol_Rpb1_1
Pfam; PF00623; RNA_pol_Rpb1_2
Pfam; PF04983; RNA_pol_Rpb1_3
Pfam; PF04998; RNA_pol_Rpb1_5 
SMART
SMART; SM00663; RPOLA_N 
PROSITE
 
PRINTS