※ dbPPT Protein Information

TagContent
UniProt Accession
Theoretical PI
8.82 
Molecular Weight
138074.25 
Genbank Protein ID
Genbank Nucleotide ID
Protein Name
DNA-directed RNA polymerase 
Gene Name
OsJ_11898 
Created Date
2009-03-24 
Organism
Oryza sativa subsp. japonica(Rice) 
NCBI Taxa ID
39947 
Phosphorylation Sites
Position
Peptide
Source
References
520
SHLRRLNSPIGREGK
dbPPT, P3DB
[1, 2]
880
TMGMRHGSYDKLDDD
dbPPT, P3DB
[1, 2]
881
MGMRHGSYDKLDDDG
dbPPT, P3DB
[1, 2]
Functional Description
 
Sequence Annotation
Keyword
DNA-directed RNA polymerase,Nucleotidyltransferase,Transcription,Transferase 
Sequence Source
UniProt 
Protein Sequence
MSLFTPQLTL LPWLQYVKSD NSSSIRVRGR RRGGDGGRGG GWGRPDEEEI TQEDAWAVIS 60
AYFEEKGLVR QQLDSFDEFI QNTMQEIVDE SADIEIRPES QHNPGRQAEF AETLHKISFG 120
QIYLSKPMMT EADGETATLF PKSARLRNLT YSAPLYVDVS YRVMKKGHDC EEVTETMEYP 180
KVFIGKVPIM LRSSYCTLFQ QSEKDLTELG ECPYDQGGYF IINGSEKVLI AQEKMSTNHV 240
YVFKKRQPNK YAYVAEVRSM AENQNRPASS MFVRMLSRAG AKGGSSGQYI RATLPYIRAD 300
IPIIIVFRAL GFVADKDILE HICYDFSDTQ MMELLRPSLE EAFVIQNQQV ALDYIGKRGA 360
TVGVTKEKRI KYAKEILQKE MLPHVGVGEF CETKKAYYFG YIIHRLLMCA LGRRAEDDRD 420
HYGNKRLDLA GPLLGGLFRM LFRKLTRDVR SYVQKCVDNG KEVNLQFAIK AKTITSGLKY 480
SLATGNWGQA NQAGTRAGVS QVLNRLTYAS TLSHLRRLNS PIGREGKLAK PRQLHNSHWG 540
MMCPAETPEG QACGLVKNLA LMVYITVGSA ANPILEFLEE WGTENFEEIS PAVIPQAAKI 600
FVNGCWVGIH RNPDLLVKTL RRLRRQIDVN TEVGVVRDIR LKELRLYTDY GRCSRPLFIV 660
ENQRLLIKKR HIRALQQRET PEEGWHDLVA KGFIEYIDTE EEETTMISMT INDLIGARHN 720
PEEAYSETYT HCEIHPSLIL GVCASIIPFP DHNQSPRNTY QSAMGKQAMG IYVTNYQLRM 780
DTLAYVLYYP QKPLVTTRAM EHLHFRQLPA GINAIVAIAC YSGYNQEDSV IMNQSSIDRG 840
FFRSLFFRSY RDEEKKMGTL VKEEFGRPNR ENTMGMRHGS YDKLDDDGLA PPGTRVSGED 900
VIIGKTSPIP QDDAQGQATR YTKRDHSTSL RHSESGMVDQ VLLTTNADGL RFVKVRMRSV 960
RIPQIGDKFS SRHGQKGTVG MTYTQEDMPW TIEGITPDII VNPHAIPSRM TIGQLIECIM 1020
GKVAAHMGKE GDATPFTDVT VDNISKALHK CGYQMRGFET MYNGHTGRKL TAMIFLGPTY 1080
YQRLKHMVDD KIHSRGRGPV QILTRQPAEG RSRDGGLRFG EMERDCMIAH GAAFFLKERL 1140
FDQSDAYRVH VCEKCGLIAI ANLKKNSFEC RGCKNKTDIV QVHIPYACKL LFQELMAMAI 1200
APRMLTQDNK TGKDQKKR 1218 
Gene Ontology
GO:0003677; F: DNA binding; IEA: InterPro
GO:0003899; F: DNA-directed RNA polymerase activity; IEA: UniProtKB-KW
GO:0032549; F: ribonucleoside binding; IEA: InterPro
GO:0006351; P: transcription, DNA-templated; IEA: InterPro 
Interpro
InterPro; IPR015712; DNA-dir_RNA_pol_su2
InterPro; IPR007120; DNA-dir_RNA_pol_su2_6
InterPro; IPR007121; RNA_pol_bsu_CS
InterPro; IPR007644; RNA_pol_bsu_protrusion
InterPro; IPR007642; RNA_pol_Rpb2_2
InterPro; IPR007645; RNA_pol_Rpb2_3
InterPro; IPR007646; RNA_pol_Rpb2_4
InterPro; IPR007647; RNA_pol_Rpb2_5
InterPro; IPR007641; RNA_pol_Rpb2_7
InterPro; IPR014724; RNA_pol_RPB2_OB-fold
Pfam
Pfam; PF04563; RNA_pol_Rpb2_1
Pfam; PF04561; RNA_pol_Rpb2_2
Pfam; PF04565; RNA_pol_Rpb2_3
Pfam; PF04566; RNA_pol_Rpb2_4
Pfam; PF04567; RNA_pol_Rpb2_5
Pfam; PF00562; RNA_pol_Rpb2_6
Pfam; PF04560; RNA_pol_Rpb2_7 
SMART
 
PROSITE
PS01166; RNA_POL_BETA 
PRINTS