※ dbPPT Protein Information

TagContent
UniProt Accession
Theoretical PI
7.35 
Molecular Weight
137657.53 
Genbank Protein ID
Genbank Nucleotide ID
Protein Name
DNA-directed RNA polymerase 
Gene Name
MTR_1g023500 
Created Date
2012-01-25 
Organism
Medicago truncatula(Barrel medic Medicago tribuloides) 
NCBI Taxa ID
3880 
Phosphorylation Sites
Position
Peptide
Source
References
494
SHLRRLNSPIGREGK
dbPPT, P3DB
[1, 2]
Functional Description
 
Sequence Annotation
Keyword
DNA-directed RNA polymerase,Nucleotidyltransferase,Transcription,Transferase 
Sequence Source
UniProt 
Protein Sequence
MMMDLEEENE FDQQMEEEDD EEEITQEDAW AVISAYFEEK GLVRQQLDSF DEFIQNTMQE 60
IVDESADIEI RPESQHNPGH QSDFAETIYK ISFGQIYLSK PMMTESDGET ATLFPKAARL 120
RNLTYSAPLY VDVSKRVIKK GHDGEEVTET QDFTKVFIGK VPIMLRSSYC TLYQNSEKDL 180
TELGECPYDQ GGYFIINGSE KVLIAQEKMS TNHVYVFKKR QPNKYAYVGE VRSMAESQNR 240
PPSTMFVRML SRASAKGGSS GQYIRATLPY IRTEIPIIIV FRALGFVADK DILEHICYDF 300
ADTQMMELLR PSLEEAFVIQ NQQVALDYIG KRGSTVGVTK EKRIKYAKDI LQKEMLPHVG 360
VGEYCETKKA YYFGYIIHRL LLCALGRRAE DDRDHYGNKR LDLAGPLLGG LFRMLFRKLT 420
RDVRGYVQKC VDNGKDVNLQ FAIKAKTITS GLKYSLATGN WGQANAAGTR AGVSQVLNRL 480
TYASTLSHLR RLNSPIGREG KLAKPRQLHN SQWGMMCPAE TPEGQACGLV KNLALMVYIT 540
VGSAAYPILE FLEEWGTENF EVLVISFIKE ISPAVIPQAT KIFVNGCWMG IHRDPDMLVR 600
TLRKLRRRFS AEGFDVVQVD VNTEVGVVRD IRLKELRIYT DYGRCSRPLF IVDKQRLLIK 660
KKDIHSLQQR ESPEDGGWHD LVSKGFIEYI DTEEEETTMI SMTINDLVQA RLNPEEAYSD 720
TYTHCEIHPS LILGVCASII PFPDHNQSPR NTYQSAMGKQ AMGIYVTNYQ FRMDTLAYVL 780
YYPQKPLVTT RAMEHLHFRQ LPAGINAIVA ISCYSGYNQE DSVIMNQSSI DRGFFRSLFF 840
RSYRDEEKKM GTLVKEDFGR PDRANTMGMR HGSYDKLDDD GLAPPGTRVS GEDVIIGKTT 900
PLSQEEQQGQ AARYSKRDHS ISLRHSETGI VDQVLLTTNA DGLRFVKVRV RSVRIPQIGD 960
KFSSRHGQKG TVGMTYTQED MPWTVEGITP DIIVNPHAIP SRMTIGQLIE CIMGKVAAHM 1020
GKEGDATPFT DVTVDNISKA LHKCGYQMRG FETMYNGHTG RRLSAMIFLG PTYYQRLKHM 1080
VDDKIHSRGR GPVQILTRQP AEGRSRDGGL RFGEMERDCM IAHGAAHFLK ERLFDQSDAY 1140
RVHVCERCGL IAIANLKKNS FECRGCKNKT DIVQVYIPYA CKLLFQELMA MAIAPRMLTK 1200
EVKAIKDQKK KGA 1213 
Gene Ontology
GO:0005829; C: cytosol; IEA: EnsemblPlants/Gramene
GO:0005665; C: DNA-directed RNA polymerase II, core complex; IEA: EnsemblPlants/Gramene
GO:0009506; C: plasmodesma; IEA: EnsemblPlants/Gramene
GO:0003677; F: DNA binding; IEA: InterPro
GO:0003899; F: DNA-directed RNA polymerase activity; IEA: UniProtKB-KW
GO:0032549; F: ribonucleoside binding; IEA: InterPro
GO:0006351; P: transcription, DNA-templated; IEA: InterPro 
Interpro
InterPro; IPR015712; DNA-dir_RNA_pol_su2
InterPro; IPR007120; DNA-dir_RNA_pol_su2_6
InterPro; IPR007121; RNA_pol_bsu_CS
InterPro; IPR007644; RNA_pol_bsu_protrusion
InterPro; IPR007642; RNA_pol_Rpb2_2
InterPro; IPR007645; RNA_pol_Rpb2_3
InterPro; IPR007646; RNA_pol_Rpb2_4
InterPro; IPR007647; RNA_pol_Rpb2_5
InterPro; IPR007641; RNA_pol_Rpb2_7
InterPro; IPR014724; RNA_pol_RPB2_OB-fold
Pfam
Pfam; PF04563; RNA_pol_Rpb2_1
Pfam; PF04561; RNA_pol_Rpb2_2
Pfam; PF04565; RNA_pol_Rpb2_3
Pfam; PF04566; RNA_pol_Rpb2_4
Pfam; PF04567; RNA_pol_Rpb2_5
Pfam; PF00562; RNA_pol_Rpb2_6
Pfam; PF04560; RNA_pol_Rpb2_7 
SMART
 
PROSITE
PS01166; RNA_POL_BETA 
PRINTS