※ dbPPT Protein Information

TagContent
UniProt Accession
Theoretical PI
6.19 
Molecular Weight
56305.45 
Genbank Protein ID
Genbank Nucleotide ID
Protein Name
Pre-mRNA-processing factor-like protein 
Gene Name
MTR_1g044720 
Created Date
2012-01-25 
Organism
Medicago truncatula(Barrel medic Medicago tribuloides) 
NCBI Taxa ID
3880 
Phosphorylation Sites
Position
Peptide
Source
References
294
TVRLWQGSDDGHYNC
dbPPT, P3DB
[1, 2]
150
TANAPVHSNGKRAAD
dbPPT, P3DB
[1, 2]
517
GQPGEDISDK*****
dbPPT, P3DB
[1, 2]
Functional Description
 
Sequence Annotation
Keyword
Repeat,WD repeat 
Sequence Source
UniProt 
Protein Sequence
MNFSGEVPDE PVVSKSSGLL FEKRLIERHI MDFGKCPVTG EPLTMDDIVP IKTGKIVKPR 60
PVQAASIPGM LGMFQNEWDG LMLSNFALEQ QLHTARQELS HALYQHDAAC RVIARLKKER 120
DEARSILAQA ERQFPISTPN SVTANAPVHS NGKRAADDEE LAPNAKKLHP GISSSIISEL 180
TDCNAALSGK RKKREIPATL ASVDALETYT QISSHPLNKT SKQGIIALDI LHSKDLIATG 240
NIDTNAVIFD RPSGQVLATL TGHSKKVTSV KFVGQGESII TGSADKTVRL WQGSDDGHYN 300
CKQILKDHSA EVEAVTVHAT NNYFVTASLD GSWCFYELSS GTCLTQVSDS SEGYTSAAFH 360
PDGLILGTGT TDSLVKIWDV KSQANVAKFD GHVGHVTAIS FSENGYYLAT AAHDGVKLWD 420
LRKLKNFRDY GPYDSATPTN SVEFDHSGSY LAVGGSDVRI LQVANVKSEW NLIKTLPDLS 480
GTGKSTCVKF GPDSKYLAVA SMDRNLRIFG QPGEDISDK 519 
Gene Ontology
GO:0005618; C: cell wall; IEA: EnsemblPlants/Gramene
GO:0009507; C: chloroplast; IEA: EnsemblPlants/Gramene
GO:0005730; C: nucleolus; IEA: EnsemblPlants/Gramene
GO:0000151; C: ubiquitin ligase complex; IEA: InterPro
GO:0004842; F: ubiquitin-protein ligase activity; IEA: InterPro
GO:0042742; P: defense response to bacterium; IEA: EnsemblPlants/Gramene
GO:0046686; P: response to cadmium ion; IEA: EnsemblPlants/Gramene 
Interpro
InterPro; IPR013915; Pre-mRNA_splic_Prp19
InterPro; IPR003613; Ubox_domain
InterPro; IPR015943; WD40/YVTN_repeat-like_dom
InterPro; IPR001680; WD40_repeat
InterPro; IPR019775; WD40_repeat_CS
InterPro; IPR017986; WD40_repeat_dom
InterPro; IPR013083; Znf_RING/FYVE/PHD
Pfam
Pfam; PF08606; Prp19
Pfam; PF00400; WD40 
SMART
SMART; SM00504; Ubox
SMART; SM00320; WD40 
PROSITE
PS00678; WD_REPEATS_1
PS50082; WD_REPEATS_2
PS50294; WD_REPEATS_REGION 
PRINTS