※ dbPPT Protein Information

TagContent
UniProt Accession
Theoretical PI
6.41 
Molecular Weight
129363.11 
Genbank Protein ID
Genbank Nucleotide ID
Protein Name
Phytochrome 
Gene Name
MTR_1g085160 
Created Date
2012-01-25 
Organism
Medicago truncatula(Barrel medic Medicago tribuloides) 
NCBI Taxa ID
3880 
Phosphorylation Sites
Position
Peptide
Source
References
101
SSVRVSGSVDGEHQP
dbPPT, P3DB
[1, 2]
99
YSSSVRVSGSVDGEH
dbPPT, P3DB
[1, 2]
Functional Description
Regulatory photoreceptor which exists in two forms that are reversibly interconvertible by light: the Pr form that absorbs maximally in the red region of the spectrum and the Pfr form that absorbs maximally in the far-red region (By similarity). 
Sequence Annotation
Keyword
Chromophore,Photoreceptor protein,Receptor,Repeat,Sensory transduction,Transcription,Transcription regulation 
Sequence Source
UniProt 
Protein Sequence
MKSKMVSELS DVREKGRKVK ERLQLGGRQT RAVLAAAAAG AGYVCDKMST TRPSQSSNNS 60
GRSRNSARII AQTTVDAKLH ATFEESGSSF DYSSSVRVSG SVDGEHQPRS NKVTTAYLNT 120
IQRGKQIQPF GCLLALDEKT CKVIAYSENA PEMLTMVSHA VPSVGDHPAL GIGTDIRTIF 180
TAPSASALQK ALGFAEVSLL NPILVHCKTS GKPFYAIIHR VTGSLIIDFE PVKPYEVPMT 240
AAGALQSYKL AAKAITRLQS LPSGSMERLC DTMVQEVFEL TGYDRVMAYK FHEDDHGEVI 300
AEVTKTGLEP YLGLHYPATD IPQAARFLFM KNKVRMIVDC HAKHVKVLQD EKLPFDLTLC 360
GSTLRAPHSC HLQYMANMDS IASLVMAVVV NDSDEDGDSA DAVLPQKKKR LWGLVVCHNT 420
TPRFVPFPLR YACEFLAQVF AIHVNKEIEL EFQILEKNIL RTQTLLCDML MRDAPLGIVS 480
QSPNIMDLVK CDGAALLYRN KLWILGATPS EPQIREIALW MSEYHTDSTG LSTDSLSDAG 540
FPGALKLNDT VCGMAAVRIT SKDIVFWFRS HTAAEIRWGG AKHEPGEQDD GRKMHPRSSF 600
KAFLEVVKAR SIPWKDFEMD AIHSLQLILR NASKDTDMID LNSKAINTRL NDLKIEGMQE 660
LEAVTSEMVR LIETATVPIL AVDVDGMVNG WNIKISELTG LPVGEAIGKH LLTLVEDSST 720
DIVKKMLNLA LQGQEEKNVQ FEIKTHGSKT DCGPISLIVN ACASRDLHEN VVGVCFVAQD 780
ITAQKTVMDK FTRIEGDYKA IVQNPNQLIP PIFGTDEFGW CCEWNAAMIK ITGWKREEVM 840
DKMLLGEVFG THMSCCRLKN QEAFVNFGIV LNKAMTGLET EKVPFGFLSR KGKYVECLLS 900
VSKKIDAEGL VTGVFCFLQL ASPELQQALH IQRLSEQTAL KRLKVLTYMR RQIRNPLSGI 960
VFSSKMLENT ELGTEQKRIV NTSSQCQRQL SKILDDSDLD SIIDGYLDLE MAEFTLHEVL 1020
VTSLSQVMNR SNTRSIRIVN DVAEHIAMET LYGDSLRLQQ VLADFLLISI NSTPNGGQVV 1080
IAATLTKEQL GKSVHLVNLE LSITHGGNGV AEAVLNQMFG NNGLESEEGI SLHISRKLLK 1140
LMNGDVRYLK EAGKSSFILS VELAAAQKLR G 1171 
Gene Ontology
GO:0016020; C: membrane; IEA: InterPro
GO:0016604; C: nuclear body; IEA: EnsemblPlants/Gramene
GO:0005524; F: ATP binding; IEA: InterPro
GO:0031516; F: far-red light photoreceptor activity; IEA: EnsemblPlants/Gramene
GO:0000155; F: phosphorelay sensor kinase activity; IEA: InterPro
GO:0009584; P: detection of visible light; IEA: InterPro
GO:0009630; P: gravitropism; IEA: EnsemblPlants/Gramene
GO:0017148; P: negative regulation of translation; IEA: EnsemblPlants/Gramene
GO:0009640; P: photomorphogenesis; IEA: EnsemblPlants/Gramene
GO:0009638; P: phototropism; IEA: EnsemblPlants/Gramene
GO:0018298; P: protein-chromophore linkage; IEA: UniProtKB-KW
GO:0017006; P: protein-tetrapyrrole linkage; IEA: InterPro
GO:0010161; P: red light signaling pathway; IEA: EnsemblPlants/Gramene
GO:0006355; P: regulation of transcription, DNA-templated; IEA: UniProtKB-KW
GO:0046685; P: response to arsenic-containing substance; IEA: EnsemblPlants/Gramene
GO:0010201; P: response to continuous far red light stimulus by the high-irradiance response system; IEA: EnsemblPlants/Gramene
GO:0010203; P: response to very low fluence red light stimulus; IEA: EnsemblPlants/Gramene
GO:0006351; P: transcription, DNA-templated; IEA: UniProtKB-KW 
Interpro
InterPro; IPR003661; EnvZ-like_dim/P
InterPro; IPR003018; GAF
InterPro; IPR029016; GAF_dom_like
InterPro; IPR003594; HATPase_ATP-bd
InterPro; IPR001610; PAC
InterPro; IPR000014; PAS
InterPro; IPR013654; PAS_2
InterPro; IPR013767; PAS_fold
InterPro; IPR016132; Phyto_chromo_attachment
InterPro; IPR013516; Phyto_chromo_BS
InterPro; IPR001294; Phytochrome
InterPro; IPR012129; Phytochrome_A-E
InterPro; IPR013515; Phytochrome_cen-reg
InterPro; IPR005467; Sig_transdc_His_kinase_core
Pfam
Pfam; PF01590; GAF
Pfam; PF02518; HATPase_c
Pfam; PF00512; HisKA
Pfam; PF00989; PAS
Pfam; PF08446; PAS_2
Pfam; PF00360; PHY 
SMART
SMART; SM00065; GAF
SMART; SM00387; HATPase_c
SMART; SM00388; HisKA
SMART; SM00086; PAC
SMART; SM00091; PAS 
PROSITE
PS50109; HIS_KIN
PS50112; PAS
PS00245; PHYTOCHROME_1
PS50046; PHYTOCHROME_2 
PRINTS
PR01033; PHYTOCHROME