※ dbPPT Protein Information

TagContent
UniProt Accession
Theoretical PI
5.87 
Molecular Weight
131805.37 
Genbank Protein ID
Genbank Nucleotide ID
Protein Name
ATP-dependent RNA helicase DHX8 
Gene Name
MTR_1g114490 
Created Date
2012-01-25 
Organism
Medicago truncatula(Barrel medic Medicago tribuloides) 
NCBI Taxa ID
3880 
Phosphorylation Sites
Position
Peptide
Source
References
321
LLPLKKSSEEEDSFR
dbPPT, P3DB
[1, 2]
366
RRPLKRMSSPERWEA
dbPPT, P3DB
[1, 2]
334
FRTNPQDSKDGPVVR
dbPPT, P3DB
[1, 2]
431
SRYSMDMSPVKIFKN
dbPPT, P3DB
[1, 2]
Functional Description
 
Sequence Annotation
Keyword
ATP-binding,Helicase,Hydrolase,Nucleotide-binding 
Sequence Source
UniProt 
Protein Sequence
MATAEIPQDG LKKLEYLSLV SKVCTELESH TGTGDKVLAE FITELGHSSN SVEEFDAILK 60
ENGAEMPDYF VRTLLTIIHA ILPPNPKKEK ENQNVKSSTS NTKFKALAIS DDRDRAKELR 120
EEIEIEAREK QKQMEPPMDR YEDDGGYRDR DRDRRDRRRD RYEEDDRRDH RRGNDRDRDR 180
RDKRGDDRGR DRDRYERRRR DEYEDGREET DGNQKGRRER DSKRGGGGSG EPELYMVYKG 240
RISRVMDTGC FVQLDDFRGK EGLVHVSQMA TRKIVNAKEV VKRDQQVYVK VISVSGSKLS 300
LSMRDVDQHT GKDLLPLKKS SEEEDSFRTN PQDSKDGPVV RTGLSGIRIV EEDDTVSSRR 360
PLKRMSSPER WEAQQLIASG VLSVSEYPTY DDEEDGVMYQ EEGAEEELEI EMNEDEPAFL 420
QGQSRYSMDM SPVKIFKNPE GSLGRAAALQ SALIKERREV REQQQRTMLD SIPKDLNRPW 480
EDPMPESGER HLAQELRGVG LSAYDMPEWK KEAVHDNQVL VVIGETGSGK TTQVTQYLAE 540
VGYTTRGKIG CTQPRRVAAM SVAKRVAEEF GCRLGEEVGY AIRFEDCTGP DTVIKYMTDG 600
MLLREILVDE SLSQYSVIML DEAHERTIYT DVLFGLLKQL VKRRPELRLI VTSATLDAEK 660
FSGYFFNCNI FTIPGRTFPV EILYAKQPES DYLDASLITV LQIHLTEPEG DILLFLTGQE 720
EIDFACQSLH ERMKGLGKNV PELIILPVYS ALPSEMQSRI FDPAPPGKRK VVVATNIAEA 780
SLTIDGIFYV IDPGFAKQNV YNPKQGLDSL VITPISQASA KQRAGRAGRT GPGKCYRLYT 840
ESAYRNEMSP TAIPEIQRIN LGMTTLSMKA MGINDLLSFD FLDPPSPQAL ISAMEQLYSL 900
GALDDEGLLT KLGRKMAEFP MDPPLSKMLL ASVDLGCSDE ILTIIAMIQT GNIFYRPREK 960
QAQADQKKAR FFQAEGDHLT LLAVYESWKS KNFSGPWCFE NFVQSRSLRR AQDVRKQLLS 1020
IMDKYKLDIV SAGKNFSKIR KAITAGFFFH AARKDPQEGY RTLVENQPVY IHPSSALFQR 1080
QPDWVIYHEL VMTTKEYMRE VTVIDPKWLV ELAPRFFKVA DPTKMSKRKR QERVEPLYDR 1140
YHEPNSWRLS KRRA 1154 
Gene Ontology
GO:0005829; C: cytosol; IEA: EnsemblPlants/Gramene
GO:0005739; C: mitochondrion; IEA: EnsemblPlants/Gramene
GO:0009506; C: plasmodesma; IEA: EnsemblPlants/Gramene
GO:0005524; F: ATP binding; IEA: UniProtKB-KW
GO:0008026; F: ATP-dependent helicase activity; IEA: InterPro
GO:0003723; F: RNA binding; IEA: InterPro 
Interpro
InterPro; IPR011545; DNA/RNA_helicase_DEAD/DEAH_N
InterPro; IPR002464; DNA/RNA_helicase_DEAH_CS
InterPro; IPR011709; DUF1605
InterPro; IPR007502; Helicase-assoc_dom
InterPro; IPR014001; Helicase_ATP-bd
InterPro; IPR001650; Helicase_C
InterPro; IPR012340; NA-bd_OB-fold
InterPro; IPR027417; P-loop_NTPase
InterPro; IPR003029; Rbsml_prot_S1_RNA-bd_dom
InterPro; IPR022967; RNA-binding_domain_S1
Pfam
Pfam; PF00270; DEAD
Pfam; PF04408; HA2
Pfam; PF00271; Helicase_C
Pfam; PF07717; OB_NTP_bind
Pfam; PF00575; S1 
SMART
SMART; SM00487; DEXDc
SMART; SM00847; HA2
SMART; SM00490; HELICc
SMART; SM00316; S1 
PROSITE
PS00690; DEAH_ATP_HELICASE
PS51192; HELICASE_ATP_BIND_1
PS51194; HELICASE_CTER
PS50126; S1 
PRINTS