※ dbPPT Protein Information

TagContent
UniProt Accession
Theoretical PI
9.06 
Molecular Weight
91344.99 
Genbank Protein ID
 
Genbank Nucleotide ID
 
Protein Name
DNA ligase 
Gene Name
BRADI3G29530 
Created Date
2012-06-13 
Organism
Brachypodium distachyon(Purple false brome Trachynia distachya) 
NCBI Taxa ID
15368 
Phosphorylation Sites
Position
Peptide
Source
References
118
EAEEKPPSPKRLKTL
dbPPT
[1, 2]
68
AVAEKPPSPAKSKRP
dbPPT
[1, 2]
Functional Description
 
Sequence Annotation
Keyword
ATP-binding,Complete proteome,DNA damage,DNA recombination,DNA repair,DNA replication,Ligase,Nucleotide-binding,Reference proteome 
Sequence Source
UniProt 
Protein Sequence
MSSSGGAGGK RSVADVLMGN ARDAARKAKK GAAGASGAAP SPKKPRAKTT AQGDDAAVEQ 60
AVAEKPPSPA KSKRPLSPAK AKSQAETSPA EKKRSPSPTR SKKLAAAPKL EAEEKPPSPK 120
RLKTLAAKSD AKLSDDALLS QSDEKQKRTS PSPTKAKGQA SQSEDKTRPS SPKKSKTSNA 180
TKSEERNTTF ELKKKGSEFD PMAAAYWKPT EPVPFLFLAQ ALDLISNESG RIVITEILSN 240
VFRTIIATTP EDLLATVYLS ANRIAPPHEG IELGIGDASI IRALAEAYGR KEEHVKKNLK 300
ELGDLGLVAK ASRLSQKMMY KPKPLTIARV LDTFRTIAKE SGKDSQDKKR SHIKGLLVAA 360
TDCEPQYIIR LLQSKMRIGL AEKTVQMALG QAAVYSEEGS PPAKVQSPFE EAAKIIKQAY 420
SVLPIYDRIV PTLLEAGVWK LPETCNFSIG VPVGPMLAKA TKSVSEIIDK FQGLEYTCEY 480
KYDGERAQIH CMEDGSVEIY SRNAERNTGK YPDVVDAVSR FRKPAVKSFV LDCEIVAYDR 540
EKKKILPFQI LSTRARKGVT INDIKVSVCT FGFDILYING KPLLQEQLKV RREHLYNSFE 600
EVPGIFQLAT AITSNDLEEI QKFLDVAVNS SCEGLIIKTL DKDATYEPAK RSNNWLKLKK 660
DYMDSVGDSL DLVPIAAFHG RGKRTGVYGS FLLACYDEQN EEYQTICNIG TGFSEQQLEE 720
RSTSLRSKVI SKPKAYYRFA DTTDPDVWFE PSEVWEVKAA DLSISPVHRA ANGIVDPNKG 780
ISLRFPRLLR VRDDKNPEHA TTSEQVADMY RAQKINHSHN QDDEDDDRD 829 
Gene Ontology
GO:0005524; F: ATP binding; IEA: UniProtKB-KW
GO:0003677; F: DNA binding; IEA: InterPro
GO:0003910; F: DNA ligase (ATP) activity; IEA: UniProtKB-EC
GO:0051103; P: DNA ligation involved in DNA repair; IEA: InterPro
GO:0006310; P: DNA recombination; IEA: UniProtKB-KW
GO:0006260; P: DNA replication; IEA: UniProtKB-KW
GO:0006302; P: double-strand break repair; IEA: EnsemblPlants/Gramene
GO:0000012; P: single strand break repair; IEA: EnsemblPlants/Gramene 
Interpro
InterPro; IPR000977; DNA_ligase_ATP-dep
InterPro; IPR012309; DNA_ligase_ATP-dep_C
InterPro; IPR012310; DNA_ligase_ATP-dep_cent
InterPro; IPR016059; DNA_ligase_ATP-dep_CS
InterPro; IPR012308; DNA_ligase_ATP-dep_N
InterPro; IPR012340; NA-bd_OB-fold
Pfam
Pfam; PF04679; DNA_ligase_A_C
Pfam; PF01068; DNA_ligase_A_M
Pfam; PF04675; DNA_ligase_A_N 
SMART
 
PROSITE
PS00697; DNA_LIGASE_A1
PS00333; DNA_LIGASE_A2
PS50160; DNA_LIGASE_A3 
PRINTS