※ dbPPT Protein Information

TagContent
UniProt Accession
Theoretical PI
5.64 
Molecular Weight
215476.88 
Genbank Protein ID
 
Genbank Nucleotide ID
 
Protein Name
DNA-directed RNA polymerase 
Gene Name
BRADI4G45065 
Created Date
2012-06-13 
Organism
Brachypodium distachyon(Purple false brome Trachynia distachya) 
NCBI Taxa ID
15368 
Phosphorylation Sites
Position
Peptide
Source
References
1446
SWAKRPSSPSLSTWA
dbPPT
[1, 2]
Functional Description
 
Sequence Annotation
Keyword
Complete proteome,DNA-directed RNA polymerase,Nucleotidyltransferase,Reference proteome,Transcription,Transferase 
Sequence Source
UniProt 
Protein Sequence
MEEDQSAVLV AEGAIKSIKL SLSTEDEILT YSINDCPVTH PSQLGNPFLG LPLETGKCES 60
CGASENGKCE GHFGYIELPV PIYHPCHVSE LRQLLSLVCL KCLRIKKGKA KQSNGKENVS 120
VTACSYCRDV PALSLKEVKT ADGAFRLELR APPRRLMKDS SWNFLDKYGF HHGGASHFRT 180
LLPEEALNIL KKIPDDTRKK LAARGYIAQS GYVMKYLPVP PNCLYIPEFT DGQSIMSYDI 240
SISLLKKILH RIEQIKKSRA GTPNFESHEA ESSDLQISIA QYIHLRGTTK GPQDTKRFTI 300
STDSSHLSTK QWLEKMRTLF ISKGSGFSSR SVLTGDPYIG VDVVGLPSEV AKRITFEEQV 360
TDINIKRLQE VVDKGLCLTY RDGQTTYAIT VGSKGYTTLK VGQTISRRIV DGDVVFLNRP 420
PSTHKHSLQA FYVYIHDDHT VKINPLICSP LAADFDGDCV HIYYPQSLAA KAEALELFSV 480
EKQLTNSHNG KVNLQLSNDS LLALKHMSSR TVLSKESANQ LAMLLSFSLP DPAVVKLKPC 540
WTITQIIQGA LPAALTCEGG RFLVKDSTVI KLDLAKESVQ ASFSDLVSSI LCVKGPGGAL 600
QFLNALQPLL MEYLLLDGFS VSLQDFNVPK VLLEEVHKSI QEQSLVLEQS RCSKSQFVEM 660
RVDNNLKDVK QQISDFVVES SHLGLLIDPK SEPSMSKVVQ QLGFVGLQLY REGKFYSSRL 720
VEDCFSSFVD KHPPIVGNQH PPEAYGLVQN SYFHGLNPYE ELVHSISTRE AIVRSSRGLT 780
EPGTLFKNLM AILRDVVICY DGTVRNICSN SIMQLKYNED DATDIPSALT PGEPVGVLAA 840
TAISNPAYKA VLDASQSNNT SWASMKEILQ TKVSYKNDTN DRKVILFLND CSCPKKFCKE 900
KAAIAVQNRL KRVTLEDCAT DICIEYHKQI LDGSSEATPA LVGHIHLEKA RLDMINVSTE 960
DILQKCQEVS LKHGKKKGHL GHLFKKITFS TCDCSFTQKP MIDGKLPKVP CLQFSFSEDI 1020
PMLSESVERA VSVLANSLCD VLLDTIIKGD PRIQEAKIMW VGSDAQSWVK NTRKVSKGEP 1080
TVEIVVEKNE ASKQGDAWRI AMDACIPVID LIDTRRSIPY GIQQVRELLG ISCSFDQIVQ 1140
RLSTTMKTVA KGILKDHLIL VANSMTCTGN LYGFNTGGYR ATFRALKVQV PFTESTLFTP 1200
MKCFEKAAEK CHSDALGCVV SSCSWGKHAA LGTGSSFQIL WNENQLKSNK EYGDGLYDFL 1260
AMVRTDQEKA RYTFLDDVDY LVEDNAMDDI CLSPELNGTH GVPTFEDNFE HQDTQNGNSW 1320
ENGTKANASW EQNASAGNDS DNWGGWSNAA AAADTGAAKP ADQGNSSWDV PATAENDSTD 1380
WGGWGNEKAK DNRTVSTEPA ELDTWSDRGA KKGTDGGGGS WGKQTNTCED SGTNLERNSW 1440
AKRPSSPSLS TWAKKNSDGG DGTWDKQANS CKKNVEQDSW KNMPVSPARN AWNKKESSRG 1500
DATWEMRAST LEEKKTSESN EGSWEKSNAQ KDSWGNTQHG SSDKMAVKDN DMQQDPWGHI 1560
ATQNINAQDD LWGSVAAKAQ TSTAENTDAQ DDSWGAVAAK AQTSTAQESW GNVAASPSDN 1620
AWKAPPISQT SAAEHTDAHN DSWGIVAAKA QTSTAQQESW GNATASPSDN AWNAAPMDLD 1680
AKQPGSWDGW SSALAEDSNK ADDSSNKNKG WKSDGWGAKG NRRDQRDNPS MPPMRPDERP 1740
PRPRFEVPAE AKKILREIEP IVSMVRKIFR ESCDGVRLPL EDEKFIKESI LEHHPEKERK 1800
VPGEIDHIMV NKHHIFQESR CFYVVLADGT HTDFSYNKCM DNYVRKTYTD AAEHADLVSQ 1860
MYFKKRDRDR AAAVDGGSTP ANASQSTQVM ETSQDEAPQE AQPETCVATQ EETRVSPQET 1920
PAATTQQEET ENNPDSASEA DYHSASEAGL PEGV 1954 
Gene Ontology
GO:0000418; C: DNA-directed RNA polymerase IV complex; IEA: EnsemblPlants/Gramene
GO:0000419; C: DNA-directed RNA polymerase V complex; IEA: EnsemblPlants/Gramene
GO:0016604; C: nuclear body; IEA: EnsemblPlants/Gramene
GO:0005507; F: copper ion binding; IEA: InterPro
GO:0003677; F: DNA binding; IEA: InterPro
GO:0003899; F: DNA-directed RNA polymerase activity; IEA: UniProtKB-KW
GO:0048038; F: quinone binding; IEA: InterPro
GO:0009308; P: amine metabolic process; IEA: InterPro
GO:0006306; P: DNA methylation; IEA: EnsemblPlants/Gramene
GO:0030422; P: production of siRNA involved in RNA interference; IEA: EnsemblPlants/Gramene
GO:0006351; P: transcription, DNA-templated; IEA: InterPro 
Interpro
InterPro; IPR015801; Cu_amine_oxidase_N2/3
InterPro; IPR021602; DUF3223
InterPro; IPR000722; RNA_pol_asu
InterPro; IPR006592; RNA_pol_N
InterPro; IPR007080; RNA_pol_Rpb1_1
InterPro; IPR007066; RNA_pol_Rpb1_3
InterPro; IPR007081; RNA_pol_Rpb1_5
Pfam
Pfam; PF11523; DUF3223
Pfam; PF04997; RNA_pol_Rpb1_1
Pfam; PF00623; RNA_pol_Rpb1_2
Pfam; PF04983; RNA_pol_Rpb1_3
Pfam; PF04998; RNA_pol_Rpb1_5 
SMART
SMART; SM00663; RPOLA_N 
PROSITE
 
PRINTS