※ dbPPT Protein Information

TagContent
UniProt Accession
Theoretical PI
5.36 
Molecular Weight
95494.99 
Genbank Protein ID
Genbank Nucleotide ID
Protein Name
Chromatin remodeling factor DDM1b 
Gene Name
OsDDM1b; OsJ_12393 
Created Date
2006-11-14 
Organism
Oryza sativa subsp. japonica(Rice) 
NCBI Taxa ID
39947 
Phosphorylation Sites
Position
Peptide
Source
References
210
ADVEGVDTPDEEEPV
dbPPT, P3DB
[1, 2]
Functional Description
 
Sequence Annotation
Keyword
 
Sequence Source
UniProt 
Protein Sequence
MVEGMVVAVA NGTKVEAAPA AGAGAAANAD SPTSVLEDEI SECKNGDASD TVEAIKQEDD 60
HLKVLAEERA DDFVDASSSL TVELAANNGD LSPHPVPVKE EDQLLEPVKE EKADDFVDAT 120
SSLPIDLEAK NGDASLITDA MKEEEDKLHE ARVKADEEEE ARKRAEAARL AFDPNARFNK 180
LDELLTQTQL YSEFLLEKME TIADVEGVDT PDEEEPVEEK KKGRGRKRKA TSAPKYNNKK 240
AKKAVAAMLT RSREDCSPED CTLTEEERWE KEQARLVPLM TGGKLKSYQI KGVKWLISLW 300
QNGLNGILAD QMGLGKTIQT IGFLAHLKGK GLDGPYLIIA PLSTLSNWVN EISRFVPSMT 360
GVIYHGDKAA RAEIRRKFMP KTTGPNFPLI VTSYEMAMSD AKQLAHYKWK YVIVDEGHRL 420
KNSKCILLRE LKRLPMDNKL LLTGTPLQNN LAELWSLLNF ILPDIFSSHQ EFESWFDFCA 480
KGGEEEQEES EEKRKVDVVS KLHAILRPFL LRRMKEDVEH MLPRKKEIII YANMTNHQKE 540
IQNHLVEQTF DEYLHEKSEI VLRRPGIKAK LNNLLIQLRK NCNHPDLLES AYDSSGMYPP 600
VEKLLEQCGK FQLLNRLLNL LLARKHKVLI FSQWTKVLDI IEYYLETKGL QVCRIDGSVK 660
LEERRRQIAE FNDLNSSMNI FILSTRAGGL GINLTSADTC ILYDSDWNPQ MDLQAMDRCH 720
RIGQTRPVHV YRLATSHSVE GRIIKKAFGK LRLEHVVIGK GQFEQDRAKP NALDEAELLA 780
LLRDEQDEED RMIQTDITDE DLLKVMDRSD LTGPPANADA APLVPLKGPG WEVVVPTKSG 840
GGMLTSLTS 849 
Gene Ontology
GO:0000786; C: nucleosome; IEA: EnsemblPlants/Gramene
GO:0005524; F: ATP binding; IEA: InterPro
GO:0004003; F: ATP-dependent DNA helicase activity; IEA: EnsemblPlants/Gramene
GO:0003677; F: DNA binding; IEA: InterPro
GO:0009294; P: DNA mediated transformation; IEA: EnsemblPlants/Gramene
GO:0006344; P: maintenance of chromatin silencing; IEA: EnsemblPlants/Gramene
GO:0090241; P: negative regulation of histone H4 acetylation; IEA: EnsemblPlants/Gramene
GO:0051574; P: positive regulation of histone H3-K9 methylation; IEA: EnsemblPlants/Gramene
GO:0044030; P: regulation of DNA methylation; IEA: EnsemblPlants/Gramene
GO:0006349; P: regulation of gene expression by genetic imprinting; IEA: EnsemblPlants/Gramene
GO:0032197; P: transposition, RNA-mediated; IEA: EnsemblPlants/Gramene 
Interpro
InterPro; IPR014001; Helicase_ATP-bd
InterPro; IPR001650; Helicase_C
InterPro; IPR027417; P-loop_NTPase
InterPro; IPR000330; SNF2_N
Pfam
Pfam; PF00271; Helicase_C
Pfam; PF00176; SNF2_N 
SMART
SMART; SM00487; DEXDc
SMART; SM00490; HELICc 
PROSITE
PS51192; HELICASE_ATP_BIND_1
PS51194; HELICASE_CTER 
PRINTS