※ dbPPT Protein Information

TagContent
UniProt Accession
Theoretical PI
6.15 
Molecular Weight
72494.47 
Genbank Protein ID
Genbank Nucleotide ID
Protein Name
Zinc finger CCCH domain-containing protein 53; OsC3H53 
Gene Name
Os07g0682400; LOC_Os07g48410; OSJNBa0008J01.35 
Created Date
2008-09-02 
Organism
Oryza sativa subsp. japonica(Rice) 
NCBI Taxa ID
39947 
Phosphorylation Sites
Position
Peptide
Source
References
486
RMLQHSNSANEMLLR
dbPPT, P3DB
[1, 2]
191
FDGGECRSPGGGDGG
dbPPT, P3DB
[1, 2]
Functional Description
 
Sequence Annotation
chain 1 682 Zinc finger CCCH domain-containing protein 53
domain 361 437 RRM
zinc finger region 229 256 C3H1-type
coiled-coil region 485 521
compositionally biased region 76 82 Poly-Ala
compositionally biased region 314 319 Poly-Gln
compositionally biased region 325 330 Poly-Ala
Keyword
Coiled coil,Complete proteome,DNA-binding,Metal-binding,Reference proteome,RNA-binding,Zinc,Zinc-finger 
Sequence Source
UniProt 
Protein Sequence
MDAYEATKVV FSRIQALDPD HAAKIMGFLL IQDHGEKEMI RLAFGPEALL HTVMAKARKE 60
LGLLPASGPG TPTSVAAAAA AAHSPFMLSR QNSGRCGTAP SPLSVSSPSS WAPPPVFSRN 120
NSISNGAGEE MVGLGDELIS PANGGGPPSP FFGGDPLMDE LQLQDQLAFL NEGGVPAGHQ 180
MPMFDGGECR SPGGGDGGLF SYNLGWANGG PGHRRSASVS ELCLGGADGL GWKPCLYYAR 240
GYCKNGSACR FVHGGLPDDA AGKMDPSAVE QQCQDFLIRS KSQRLAAAAF PYSPTGSLPG 300
SPSAATKCLS LLLQQQQQQN ESQRAAAAAA LMLGGDEAHK FMGRPRLERA DFASMMNPGS 360
RQIYLTFPAD STFREEDVSN YFSIYGPVHD VRIPYQQKRM FGFVTFVYPE TVKLILAKGN 420
PHFICDARVL VKPYKEKGKV PDKYRKQHQP GERVDFSSCT TPTGLDARDP FDMHQLGARM 480
LQHSNSANEM LLRRKLEEQQ QAAELQQAIE LHSRRLMGLQ LLDFKSRAAA APTPIGNPFS 540
ASQTAANATG ESPPDSGELG KGSGFLLAHK KAVNGADKEE STGESSSPNT DSDQSVEHNL 600
PDSPFASPTK SAGFARDPFA PTEAEISATA STGCSATYVG INNGASNGGT NHLLPSALDM 660
PSPKPYFFPM SRLASDHGAI GM 682 
Gene Ontology
GO:0003677; F: DNA binding; IEA: UniProtKB-KW
GO:0046872; F: metal ion binding; IEA: UniProtKB-KW
GO:0000166; F: nucleotide binding; IEA: InterPro
GO:0003723; F: RNA binding; IEA: UniProtKB-KW 
Interpro
InterPro; IPR012677; Nucleotide-bd_a/b_plait
InterPro; IPR000504; RRM_dom
InterPro; IPR000571; Znf_CCCH
Pfam
Pfam; PF00642; zf-CCCH 
SMART
SMART; SM00360; RRM
SMART; SM00356; ZnF_C3H1 
PROSITE
PS50102; RRM
PS50103; ZF_C3H1 
PRINTS