※ dbPPT Protein Information

TagContent
UniProt Accession
Theoretical PI
9.44 
Molecular Weight
65127.33 
Genbank Protein ID
Genbank Nucleotide ID
Protein Name
DEAD-box ATP-dependent RNA helicase 53 
Gene Name
Os07g0143700; LOC_Os07g05050 
Created Date
2007-04-03 
Organism
Oryza sativa subsp. japonica(Rice) 
NCBI Taxa ID
39947 
Phosphorylation Sites
Position
Peptide
Source
References
512
DFDGFGSSPNRGGRS
dbPPT, P3DB
[1, 2]
511
GDFDGFGSSPNRGGR
dbPPT, P3DB
[1, 2]
Functional Description
 
Sequence Annotation
chain 1 602 DEAD-box ATP-dependent RNA helicase 53
domain 115 288 Helicase ATP-binding
domain 317 462 Helicase C-terminal
nucleotide phosphate-binding region 128 135 ATP
short sequence motif 84 112 Q motif
short sequence motif 236 239 DEAD box
splice variant 324 340 In isoform 2.
splice variant 324 330 In isoform 3.
splice variant 331 602 In isoform 3.
Keyword
Alternative splicing,ATP-binding,Complete proteome,Helicase,Hydrolase,Nucleotide-binding,Reference proteome,RNA-binding 
Sequence Source
UniProt 
Protein Sequence
MFSLLSRALC AASSSPAAPR GRSLLAALLS PSASPLDPCR GPAAPEPPRR RAFHGSPSPL 60
GFRSTPASWS SPEAGAAVGG DDGLEVARLG ISPWIVERLA ARGITRLFPI QRAVLDPAMQ 120
GKDMIGRART GTGKTLAFGI PIMDRILRHN EKNGSGRNPL AIILAPTREL ARQVEKEFKE 180
SAPLDSLCVY GGVPISHQMR ALNYGVDVVV GTPGRIIDLL RRGVLNLSEI QFVVLDEADQ 240
MLAVGFDEDV EVIMENLPQN RQSMLFSATM PSWIRKITSK YLKDPIIIDL VGDEDQKLPE 300
GISLYSIASE HYGKPSILGP LIKEHANGGK CIVFTQTKRE ADRLAYAMGR SYACQALHGD 360
ISQNQRERTL SGFRDGRFNI LVATDVAARG LDIPNVDLVI HYELPNTSEL FVHRSGRTAR 420
AGKKGSAILI YTNDQARAVR IIEQDIGCKF TELPKIEVAD EASDMFNVVR DNRSRLAGSP 480
RTGGSSFGRG GYGGFGEGRS RGFGDFDGFG SSPNRGGRSR DAGSRYGSGF GDFRRPSNAF 540
GRSSSKQPDG FGFGDFGEGN FSRNGNRRSR SFDDSGSTRY SRRPNGFGTS DFGRSGGFDD 600
SN 602 
Gene Ontology
GO:0005618; C: cell wall; IEA: EnsemblPlants/Gramene
GO:0005739; C: mitochondrion; IEA: EnsemblPlants/Gramene
GO:0005730; C: nucleolus; IEA: EnsemblPlants/Gramene
GO:0043234; C: protein complex; IEA: EnsemblPlants/Gramene
GO:0005524; F: ATP binding; IEA: UniProtKB-KW
GO:0008026; F: ATP-dependent helicase activity; IEA: InterPro
GO:0003677; F: DNA binding; IEA: EnsemblPlants/Gramene
GO:0003723; F: RNA binding; IEA: UniProtKB-KW
GO:0000373; P: Group II intron splicing; IEA: EnsemblPlants/Gramene
GO:0009409; P: response to cold; IEA: EnsemblPlants/Gramene
GO:0009651; P: response to salt stress; IEA: EnsemblPlants/Gramene
GO:0009414; P: response to water deprivation; IEA: EnsemblPlants/Gramene 
Interpro
InterPro; IPR011545; DNA/RNA_helicase_DEAD/DEAH_N
InterPro; IPR014001; Helicase_ATP-bd
InterPro; IPR001650; Helicase_C
InterPro; IPR027417; P-loop_NTPase
InterPro; IPR014014; RNA_helicase_DEAD_Q_motif
Pfam
Pfam; PF00270; DEAD
Pfam; PF00271; Helicase_C 
SMART
SMART; SM00487; DEXDc
SMART; SM00490; HELICc 
PROSITE
PS51192; HELICASE_ATP_BIND_1
PS51194; HELICASE_CTER
PS51195; Q_MOTIF 
PRINTS