※ dbPPT Protein Information

TagContent
UniProt Accession
Theoretical PI
9.56 
Molecular Weight
202379.05 
Genbank Protein ID
Genbank Nucleotide ID
Protein Name
Retrotransposon protein, putative, unclassified 
Gene Name
LOC_Os03g59500 
Created Date
2006-08-22 
Organism
Oryza sativa subsp. japonica(Rice) 
NCBI Taxa ID
39947 
Phosphorylation Sites
Position
Peptide
Source
References
103
RGPDARLSIERRRNG
dbPPT, P3DB
[1, 2]
Functional Description
 
Sequence Annotation
Keyword
 
Sequence Source
UniProt 
Protein Sequence
MAERAVAHNL SPSASGDDGE QNPRRRARTP PPPSRRSLRR EERLGAGGQS SAAKASGAAT 60
TGSVSSRRRA RRAAAVTRRS SAIPSSTPPT QEDVRRGPDA RLSIERRRNG RRAAHATEGA 120
SSSGAPLRYG RGGQPPVPPL GGVGCRAFVA SLRNVRWPPR FRPTITEKYD GSVNPAEFLQ 180
VYTTGIEAAG GDDRVMANFF PMALKGQARG WLMNLPPASV HSWEDLCQQF TMNFQGTYPR 240
PGEEADLHAV QRRDDESLRS YIQRFCQVRN TIPCIPAHAV IYAFRGGVRH NRMLKKIASK 300
EPQTTAELFQ LADRVARKEE AWTWNSTGSG VAASAAPGSA ARSGRRDRRR KKRSAHSDDE 360
GHVLAVEGAS RATRKGRPAS DKKKEAGAPS RGRPTGKWCA VHNTSLHDLA DCRAVKSLAE 420
RTRKWEEERR QERREGKAPA APSGNRRSEA KQKAPAEDID DGDDDLGFQE PGATIATVDG 480
GACAHASRRS LKAMKRELLA AAPTHEATRR ARWSEVALTF DQTDHPPCVA RGGQIAMVVS 540
PTVCNVKLGR VLIDGGAALN ILSPAAFDAI KAPGMVLRPS QLIIGVTPGH TWPLGHIDLP 600
VTFGGSANFR TERVNFDVAD LSLPYNAVLG RPALVKFMAA VHYAYLQMKM PGPGGPISVH 660
GNLKVALACM EQCANHLAAA SKPEGGNERL STSVPAAPRQ RMITCDEVPE DALVSFLRAN 720
ADVFAWRPAD MPGVPREVIE HRLAVRPGAR PVRQKVRRQA PERQAFIREE VARLLEAGFI 780
REVIHPEWLA NPVVVPKANG KLRMCIDYTD LNKACPKDPY PLPRIDQIVD STAGCDLLCF 840
LDAYSGYHQI RMAREDEEKT AFITPIGTYC YTTMPFGLKN AGPTFQRTTR ISLGSQIGRN 900
VEAYVDDLVV KTRNQETLLS DLAETFESLR SARIKLNPDK CVFGVPAGKL RGFLVSARGI 960
EANPEKIRAI ERMRPPSKLR DVQCVTGCMA ALSRFISRLG EKALPLFKLL KRSGPFTWTE 1020
EAERALTQLK AYLSSPPVLV APEPDEPLLL YMAATPQVVS AALVVERDED NPHSAHPHPA 1080
STRPGREQAG EAPEPNGGPR PPTAGAGPPP ACPTVPGAPD PQDGPGATAG RPRLSPSDPE 1140
VVGTEAECAP HGLSDEERPG DAAPGEKDRP RRKVQRPVYF VSEALRDAKT RYPQAQKMLY 1200
AILMASRKLR HYFQAHRVTV VTSYPLGQIL HNREGTGRVV KWAIELSEFD LRFEPRHAIK 1260
SQALADFVAE WTPAPEPISI PEASSGPSQL PHTAYWVMQF DGSLSLQGAG AGVTLTSPSG 1320
DVLRYLVRLD FRATNNMAEY EGLLAGLRVA AGLGIRRLLV LGDSQLVVNQ VCKEYRCSDP 1380
QMNAYVRQVR RMERHFDGIE LRHVPRRDNA VADELSMLAS SRAQTPPGAF EERLAQPSAR 1440
PDPLGETDAP ERPPRPVGVQ ASGPEGSAPS SPRLIAWITE IQAYLADKTL PEDREWSERV 1500
QRISKRYVLV EGTLYRRAAN GVLLKCIPRE QGVELLADIH EGECGAHSAS HSLVGKAFRQ 1560
GFYWPTALND AVDLVRRCRA CQFHAKQTHQ PAQALQTIPL SWPFAVWGLD ILGPFRRAPG 1620
GFEYLYVAVD KFTKWPEAYP VIKIDKHSAL KFIRGITARF GVPNRIITDN GTQFTSELFG 1680
DYCEDMGIKL CFASPAHPRS NGQVERANAK ILKGLKTKTF NILKKHGDSW IEELPAVLWA 1740
NRTTPSRATG ETPFFLVYGA EAVLPSELTL RSPRATMYCE ADQDQLRRDD LDYLEERRRR 1800
AALRAARYQQ SLRRYHQRHV RARHSASTTS SYAASKRVLD 1840 
Gene Ontology
GO:0003723; F: RNA binding; IEA: InterPro
GO:0003964; F: RNA-directed DNA polymerase activity; IEA: InterPro
GO:0004523; F: RNA-DNA hybrid ribonuclease activity; IEA: InterPro
GO:0015074; P: DNA integration; IEA: InterPro 
Interpro
InterPro; IPR001584; Integrase_cat-core
InterPro; IPR005162; Retrotrans_gag_dom
InterPro; IPR012337; RNaseH-like_dom
InterPro; IPR002156; RNaseH_domain
InterPro; IPR000477; RT_dom
Pfam
Pfam; PF03732; Retrotrans_gag
Pfam; PF00665; rve
Pfam; PF00078; RVT_1 
SMART
 
PROSITE
PS50994; INTEGRASE
PS50879; RNASE_H 
PRINTS