※ dbPPT Protein Information

TagContent
UniProt Accession
Theoretical PI
9.13 
Molecular Weight
218913.15 
Genbank Protein ID
Genbank Nucleotide ID
Protein Name
Retrotransposon protein, putative, unclassified 
Gene Name
LOC_Os03g59410 
Created Date
2006-08-22 
Organism
Oryza sativa subsp. japonica(Rice) 
NCBI Taxa ID
39947 
Phosphorylation Sites
Position
Peptide
Source
References
179
GGPDARISIERRRNG
dbPPT, P3DB
[1, 2]
Functional Description
 
Sequence Annotation
Keyword
 
Sequence Source
UniProt 
Protein Sequence
MAEQAKAHNL SPSVSGDDGE PNPRRRARTP PPPPRQSPRR EEALERVEGS ATSTSTGDGE 60
GRRDGERRLL VYGDGSTPQG ALQAAGALLR HPPIVPDPES PAQRWLDDVA NLVMTARQRL 120
GAGGWSSATK TSGAATTGSV SSRRRARRAA AVARHSAATP SSAPPTQEDL RGGPDARISI 180
ERRRNGRRAA HATEGASSSG VSHQHGRGDQ PSVPPVGGVG CRAFVASLRN VRWSPRFRPT 240
IAEKYDGSVN PAEFLQVYTT GIEAAGGDDR VMANFFPMAL KGQARGWLMN LPPASIHSWE 300
DLCQQFTMNF QGTYPRPGEE ADLHAVQRRD DESLRSYIQR FCQVRNTIPC IPAHAVIYAF 360
RGGVRHNRML EKIASKEPQT TAELFQLADR VARKEEAWTW NPSGSGVAAS AAPGSAARTG 420
RRDRRRKKRS AHSDDEGHVL AVEGASRATR KGRPASDKKK EAGAPYWERP TGKWCIVHNT 480
SLHDLADCRA VKSLAERTRK WEEERRQERR EGKSSAVPSG NRRSEAKQKA PAEDIDDGDD 540
DLGFQEPGAT IATVDGGACA HVSRRSLKAM KRELLAAAPT HEATCRARWS EVALTFDQTD 600
HPPCVARGGQ IAMVVSPTVC NVKLGRVLID GGAALNILSP AAFDAIKAPG MVLRPSQPII 660
GVTPGHTWPL GHIDLPVTFG GSANFRTERV NFDVADLSLP YNAVLGRPAL VKFMAAVHYA 720
YLQMKMPGPG GPISVHGDLK VALACMEQRA DHLTAASKPE GGDERLGTSA PAAPRQRIVT 780
CDEVPEDALV SFLRANADVF AWRPADMPGV PREVIEHRLA VRSGARPVRQ KVRRQAPERQ 840
AFIREEVARL LEAGFIREVI HPEWLANPVV VPKANGKLRM CIDYTDLNKA CPKDPYPLPR 900
IDQIVDSTAG CDLLCFLDAY SGYHQIRMAR EDEEKTAFIT PIGTYCYTTM PFGLKNAGPT 960
FQRTTRISLG SQIGRNVEAY VDDLVVKTRN QETLLSDQAE TFESLRSARI KLNPDKCVFG 1020
VPAGKLLGCM AALSRFISRL GEKALPLFKL LKRSGPFTWT EEAERALTQL KAYLSSPPVL 1080
VAPEPNEPLL LYLAATPQVV SAALVVERDE DNPHSAHPHP MLAWPGREQG GEAPEPNGGP 1140
RPPTTGAGPL PACQTVPGAP DPQDGPRATA GRPHLSPSDP EANPVPTRPG REQGEEAPEP 1200
NGGLRPLTTG VGPLPACPTT PGAPDPQDGP EATVGRLPLS SSDPEVVGTE DECTPRGRLD 1260
KERPRDVAPS EEDRPHRKVQ RPVYFVSEAL WDAKTRYPQA QKMLYAILMA SRKLRHYFQA 1320
HRVTVVTSYP LGQILHNREG TGRVVKWAIE LSEFDLHFEP RHAIKSQALA DFVAEWTPAP 1380
EPVSVPEASS GPSQLPHTAH WVMQFDGSLS LQGAGAGVTL TSPSGDVLRY LVRLDFRATN 1440
NMAEYEGLLA GLRVAAGLGI RRLLVLGDSQ LVVNQVCKEY RCSDPQMDAY VRQVRRMERH 1500
FDGIELRHVP RRDNTVADEL SRLASSRAQT PPGAFEERLA QPSARPDPLG ETDAPDRPPM 1560
PVGVQASGPK GSAPSSLRLI AWIAEIQAYL TDKTLPEDRE GSERVQRISK RYVLVEGTLY 1620
RRAANGILLK CIPREQGVEL LADIHEGECG SHSASRTLVG KAFRQGFYWP TALNDAVDLV 1680
RRCRACQFHA KQIHQPAQAL QIIPLSWPFA VWGLDILGPF RRAPGGFEYL YVAIDKFTKW 1740
PEAYPVVKID KHSALKFIKG ITARFGVPNR IITDNGTQFT SELFGDYCED MGIKLCFASP 1800
AHPRSNGQVE RANVEILRGL KTKTFNILKK HGDSWIEELP AVLWANRTTP NRATGETPFF 1860
LVYGAEAVLP SELTLRSPRA TMYCEADQDQ IRRDDLDYLE ERRRRAALRA ARYQQSLRRY 1920
HQRHVRARSL CVDDLVLRRV QTRAGLSKLS PMWEGPYRVI GVPRPGSVRL ATGDGTELPN 1980
PWNIEHLRRF YP 1992 
Gene Ontology
GO:0003723; F: RNA binding; IEA: InterPro
GO:0003964; F: RNA-directed DNA polymerase activity; IEA: InterPro
GO:0004523; F: RNA-DNA hybrid ribonuclease activity; IEA: InterPro
GO:0015074; P: DNA integration; IEA: InterPro 
Interpro
InterPro; IPR001584; Integrase_cat-core
InterPro; IPR005162; Retrotrans_gag_dom
InterPro; IPR012337; RNaseH-like_dom
InterPro; IPR002156; RNaseH_domain
InterPro; IPR000477; RT_dom
Pfam
Pfam; PF03732; Retrotrans_gag
Pfam; PF00665; rve
Pfam; PF00078; RVT_1 
SMART
 
PROSITE
PS50994; INTEGRASE
PS50879; RNASE_H 
PRINTS