※ dbPPT Protein Information

TagContent
UniProt Accession
Theoretical PI
9.59 
Molecular Weight
203326.71 
Genbank Protein ID
Genbank Nucleotide ID
Protein Name
Retrotransposon protein, putative, unclassified 
Gene Name
LOC_Os03g27140 
Created Date
2006-08-22 
Organism
Oryza sativa subsp. japonica(Rice) 
NCBI Taxa ID
39947 
Phosphorylation Sites
Position
Peptide
Source
References
179
RGPDARLSIERRRNG
dbPPT, P3DB
[1, 2]
Functional Description
 
Sequence Annotation
Keyword
 
Sequence Source
UniProt 
Protein Sequence
MAERAVTHNL SPSASGDDGE QNPRRRARTP PPPSRRSLRR EEALEGVERS ATSPPTSDGE 60
GWRDGERRLL VYGDGSTPQG VLQAAGALLR HPPVVPDPET PARRWLDDVA DLVMTAQQRL 120
GAGGRSSATK TSGAATAGFV SSRRKARRAA AVTRRSSAIP SSTPPTQEDV RRGPDARLSI 180
ERRRNGRRAA HATEGASSSG APLRFGRGGQ PPVPPVGGVG CRAFVASLRN VRWPPRFRPT 240
ITEKYDGSVN PAEFLQVYMT GIEAAGGDDK VMANFFPMAL KGQARGWLMN LPPASVHSWE 300
DLCQQFTMNF QGTYPRPGEE ADLHAVQRRE DESLRLYIQR FCQVRNTIPC IPAHAVIYAF 360
RGGVRHNRML EKIASKEPQT TAELFQLADR VARKEEAWTW NSTGSGVAAS AAPGSVARLG 420
RRDRRRKKKS AHSDDEGHVL AVEGASRATR KGRPASDKKK EAGAPSRERP TGKWCTVHNT 480
SLHDLADCRA VKSLAERTRK WEEERRQERR EGKAPAAPSG NRRSEAKQKA PAEDIDDGDD 540
DQGFQEPGAT IATVDGGACA HASRRSLKAM KRELLAAAPT HEATRRARWS EVALTFDQTD 600
HPPCVARGGQ IAMVVSPTVC NVKLGRVLID GGAALNILSP AAFDAIKAPG MVLRPSQPII 660
GVTPGHTWPL GHIDLPVTFG GSANFRTERV DFDVADLSLP YNAVLGRPAL VKFMAAVHYA 720
YLQMKMPGPG GPITVHGDLK VALACMEQRA DHLAAASKPE GGNERLSTSV PAAPRQRMIT 780
CDEVPEDALV SFLRANADIF AWRPADMPGV PREVIEHRLA VRPGARPVRQ KVRRQAPERQ 840
AFIREEVARL LEAGFIREVI HPEWLANPVV VPKANGKLRM CIDYTDLNKA CPKDPYPLPR 900
IDQIVDSTAG CDLLCFLDAY SGYHQIRMAR EDEEKTAFIT PIGTYCYTIM PFGLKNAGPT 960
FQRTTRISLD SQIGRNVEAY VDDLVVKTRN QETLLSDLAE TFESLRSARI KLNPDKCVFG 1020
VPAGKLLGFL VSARGIEANP EKIRAIEQMR PPSKLRDVQC VAGCMAALSR FISRLGEKAL 1080
PLFKLLKRSG PFTWTEEAER ALTQLKAYLS SPPVLVAPWS ARRWLWSAMR TTLTPRIPTL 1140
CRLDPGESRE ERPPTDGAGP PPACPTVPGA PDPQDGPGAT AGRPRLPPSD PEVVGTEAEC 1200
APRGLSDEER PGDAAPSEED RPRRKVQRPV YFVSEALRDA KTRYPQAQKM LYAILMASRK 1260
LRHYFQAHRV TVVTSYPLGQ ILHNREGTGR VGAGTGVTLT SPSGDVLRYL VRLDFRATNN 1320
MAEYEGLLAG LRVAAGLGIR RLLVLGDSQL VVNQVRCMER HFDGIELRHV PRRDNAVSDE 1380
LSRLASSRAQ TPPGAFEERL AQLSARPDPL GETDAPERPP RPVGVQASGP EGSVPGSPRL 1440
IAWITEIQAY LADKILPEDR EGSERVRRIS KRYVLVEGTL YRRAANGILL KCIPREQGVE 1500
LLADIHEGEC GAHSASRTLV GKAFRQGFYW PTALNDAVDL VRRCRACQFH AKQTHQPAQA 1560
LQTIPLSWPF VVWGLDILGP FRRAPGGFEY LYVAVDKFTK WPEAYPVIKI DKHSALKFIR 1620
GITARVGFTS ELFGDYCEDM GIKLCFTSPA HPRSNGQVER ANAEILKGLK TKTFNILKKH 1680
GDSWIEELPA VLWANRTTPS RATGETPFFL VYGAEAVLPS ELTLRSPWAT MYCEADQDQL 1740
RRDDLDYLEE RRRRAALRAA RYQQSLRRYH QRHVRARSLC VDDLVLRRVQ TRAGLSKLSP 1800
MWEGPYRVIG VPRQGSVRLA TGDGIELPNP WNIEHLRRFY P 1841 
Gene Ontology
GO:0003723; F: RNA binding; IEA: InterPro
GO:0003964; F: RNA-directed DNA polymerase activity; IEA: InterPro
GO:0015074; P: DNA integration; IEA: InterPro 
Interpro
InterPro; IPR001584; Integrase_cat-core
InterPro; IPR005162; Retrotrans_gag_dom
InterPro; IPR012337; RNaseH-like_dom
InterPro; IPR000477; RT_dom
Pfam
Pfam; PF03732; Retrotrans_gag
Pfam; PF00665; rve
Pfam; PF00078; RVT_1 
SMART
 
PROSITE
PS50994; INTEGRASE 
PRINTS