※ dbPPT Protein Information

TagContent
UniProt Accession
Theoretical PI
8.85 
Molecular Weight
136848.39 
Genbank Protein ID
Genbank Nucleotide ID
Protein Name
Retrotransposon protein, putative, Ty1-copia subclass 
Gene Name
LOC_Os03g20080 
Created Date
2006-08-22 
Organism
Oryza sativa subsp. japonica(Rice) 
NCBI Taxa ID
39947 
Phosphorylation Sites
Position
Peptide
Source
References
826
RPKTRLQSGIRKEKS
dbPPT, P3DB
[1, 2]
Functional Description
 
Sequence Annotation
Keyword
 
Sequence Source
UniProt 
Protein Sequence
MAGSSSSTAS TNPLFGVQVS KKLTKGNYAL WSAQVLAAIR GARLDGHITG ATAAPSMEIE 60
KTASDKTTEK IVNPAYQEWF ASDQQVLGFL LSTLSRDILT QVATASTAAQ AWQQVCAMFT 120
AQTKARSLNV RLTLTNTQKG NMSISEYCGK MKALANEIAS SGKPLDEEDL VAYVLNGLDD 180
DFEPVVSAIV ARNESTTMAE VYSQLLNFEN RQALRQAHAS VNAAARCRGV FQRGRGGGRG 240
TRGRSNPAAP GRGRGTGGNQ TRGGNDRPIC QVCLKRGHVA AECWHRYDET YVPDERSAAA 300
AAAYGIDTNW YLDTGATDHI TNELDKLDVR EKYKGGDKIH TASGAGMEIK HIGDSVIHTP 360
TRELHLKNIL HVPQAKKNLI SAHRLAMDNF AFLEVHSNYF LIKDRVTRNT ILKGRCRRRL 420
YSLPTSPAKQ VHAATTPSFS RWHSRLGHPA VPIVTRVLSK NNLPCSTVAN KDSICDACQK 480
GKSHQLPYPK SSSVSSQPLE LIFSDVWGPA PISVGGKKFY NGSAERKHRH LIEVALTLLA 540
HASMPIKFWD EAVLAAAYLI NRTPSKVINF ACPLEQLFKE KPNYTALRIF GCAVWPNLRP 600
YNKHKLAFRS KRCVFLGYSN LHKGFKCLEI ATGRVYVSRD VTFDESIFPF SELHSNAGAR 660
LRAEISLLPP SLVPHLSSLG GEQNNHVLNY PPNVTDQFGE ENAEIGEEIV ANGEENAAAA 720
ADENAAAAAN GGAQDDVHGV AYDASPEHSS PVTDDATASA AEQHGNPIQE EHLVQASPQT 780
ASSTSPSVAS SAGVHDDVTT DQSDQTDQAM PEAAVAPIRP KTRLQSGIRK EKSLEEAVNN 840
KHWKEAMDAE YMALIENKTW HLVPPQKGRN VIDCKWVYKV KRKADGSLDR YKARLVAKGF 900
KQRYGIDYED TFSPVVKAAT IRIVLSLAVS RGWSLRQLDV KNAFLHGVLE EEVYMKQPPG 960
YEKKSMPNYV CKLDKALYGL KQAPRAWYSR LSTKLSELGF VPSKADTSLF FYKKGQVSIF 1020
LLIYVDDIIV ASSVPDATST LLQELSKDFA LKDLGDLHYL LGIEVHKVKD GLMLSQEKYA 1080
SDLLRRVGMY ECKPVSTPLS TSEKLSVNEG TLLGPQDSTQ YKSVVGALQY LTLTRPDISF 1140
SINKILLQEL GVESPRAAKL WCDNLGAKYL SANPIFHART KHIEVDFHFV RERVARKLLE 1200
IAYISTKDQV ADGFTKAIPV RQMEMFKNNF NLERVRTEEE C 1241 
Gene Ontology
GO:0003676; F: nucleic acid binding; IEA: InterPro
GO:0008270; F: zinc ion binding; IEA: InterPro 
Interpro
InterPro; IPR025724; GAG-pre-integrase_dom
InterPro; IPR012337; RNaseH-like_dom
InterPro; IPR013103; RVT_2
InterPro; IPR001878; Znf_CCHC
Pfam
Pfam; PF13976; gag_pre-integrs
Pfam; PF07727; RVT_2 
SMART
SMART; SM00343; ZnF_C2HC 
PROSITE
 
PRINTS