※ dbPPT Protein Information
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UniProt Accession | |||||||||||||||||||||||||||||||||||||||
Theoretical PI | 5.95 | ||||||||||||||||||||||||||||||||||||||
Molecular Weight | 128493.32 | ||||||||||||||||||||||||||||||||||||||
Genbank Protein ID | |||||||||||||||||||||||||||||||||||||||
Genbank Nucleotide ID | |||||||||||||||||||||||||||||||||||||||
Protein Name | Phytochrome B | ||||||||||||||||||||||||||||||||||||||
Gene Name | PHYB; PHYB1; Os03g0309200; LOC_Os03g19590 | ||||||||||||||||||||||||||||||||||||||
Created Date | 2007-09-11 | ||||||||||||||||||||||||||||||||||||||
Organism | Oryza sativa subsp. japonica(Rice) | ||||||||||||||||||||||||||||||||||||||
NCBI Taxa ID | 39947 | ||||||||||||||||||||||||||||||||||||||
Phosphorylation Sites |
Functional Description Regulatory photoreceptor which exists in two forms that are reversibly interconvertible by light: the Pr form that absorbs maximally in the red region of the spectrum and the Pfr form that absorbs maximally in the far-red region. Photoconversion of Pr to Pfr induces an array of morphogenic responses, whereas reconversion of Pfr to Pr cancels the induction of those responses. Pfr controls the expression of a number of nuclear genes including those encoding the small subunit of ribulose-bisphosphate carboxylase, chlorophyll A/B binding protein, protochlorophyllide reductase, rRNA, etc. It also controls the expression of its own gene(s) in a negative feedback fashion. Sequence Annotation chain 1 1171 Phytochrome B domain 259 442 GAF domain 661 732 PAS 1 domain 795 866 PAS 2 domain 943 1161 Histidine kinase compositionally biased region 39 51 Poly-Gly binding site 364 Phytochromobilin chromophore (covalent; via 1 link) Keyword Chromophore,Complete proteome,Photoreceptor protein,Receptor,Reference proteome,Repeat,Sensory transduction,Transcription,Transcription regulation Sequence Source UniProt Protein Sequence MASGSRATPT RSPSSARPAA PRHQHHHSQS SGGSTSRAGG GGGGGGGGGG GAAAAESVSK 60 AVAQYTLDAR LHAVFEQSGA SGRSFDYTQS LRASPTPSSE QQIAAYLSRI QRGGHIQPFG 120 CTLAVADDSS FRLLAYSENT ADLLDLSPHH SVPSLDSSAV PPPVSLGADA RLLFAPSSAV 180 LLERAFAARE ISLLNPLWIH SRVSSKPFYA ILHRIDVGVV IDLEPARTED PALSIAGAVQ 240 SQKLAVRAIS RLQALPGGDV KLLCDTVVEY VRELTGYDRV MVYRFHEDEH GEVVAESRRN 300 NLEPYIGLHY PATDIPQASR FLFRQNRVRM IADCHAAPVR VIQDPALTQP LCLVGSTLRS 360 PHGCHAQYMA NMGSIASLVM AVIISSGGDD DHNISRGSIP SAMKLWGLVV CHHTSPRCIP 420 FPLRYACEFL MQAFGLQLNM ELQLAHQLSE KHILRTQTLL CDMLLRDSPT GIVTQSPSIM 480 DLVKCDGAAL YYHGKYYPLG VTPTEVQIKD IIEWLTMCHG DSTGLSTDSL ADAGYPGAAA 540 LGDAVSGMAV AYITPSDYLF WFRSHTAKEI KWGGAKHHPE DKDDGQRMHP RSSFKAFLEV 600 VKSRSLPWEN AEMDAIHSLQ LILRDSFRDS AEGTSNSKAI VNGQVQLGEL ELRGIDELSS 660 VAREMVRLIE TATVPIFAVD TDGCINGWNA KVAELTGLSV EEAMGKSLVN DLIFKESEET 720 VNKLLSRALR GDEDKNVEIK LKTFGPEQSK GPIFVIVNAC SSRDYTKNIV GVCFVGQDVT 780 GQKVVMDKFI NIQGDYKAIV HNPNPLIPPI FASDENTCCS EWNTAMEKLT GWSRGEVVGK 840 LLVGEVFGNC CRLKGPDALT KFMIVLHNAI GGQDCEKFPF SFFDKNGKYV QALLTANTRS 900 RMDGEAIGAF CFLQIASPEL QQAFEIQRHH EKKCYARMKE LAYIYQEIKN PLNGIRFTNS 960 LLEMTDLKDD QRQFLETSTA CEKQMSKIVK DASLQSIEDG SLVLEKGEFS LGSVMNAVVS 1020 QVMIQLRERD LQLIRDIPDE IKEASAYGDQ YRIQQVLCDF LLSMVRFAPA ENGWVEIQVR 1080 PNIKQNSDGT DTMLFLFRFA CPGEGLPPEI VQDMFSNSRW TTQEGIGLSI CRKILKLMGG 1140 EVQYIRESER SFFHIVLELP QPQQAASRGT S 1171 Gene Ontology GO:0005829; C: cytosol; IEA: EnsemblPlants/Gramene GO:0016020; C: membrane; IEA: InterPro GO:0016604; C: nuclear body; IEA: EnsemblPlants/Gramene GO:0005524; F: ATP binding; IEA: InterPro GO:0031516; F: far-red light photoreceptor activity; IEA: EnsemblPlants/Gramene GO:0000155; F: phosphorelay sensor kinase activity; IEA: InterPro GO:0031517; F: red light photoreceptor activity; IEA: EnsemblPlants/Gramene GO:0009687; P: abscisic acid metabolic process; IEA: EnsemblPlants/Gramene GO:0006325; P: chromatin organization; IEA: EnsemblPlants/Gramene GO:0010617; P: circadian regulation of calcium ion oscillation; IEA: EnsemblPlants/Gramene GO:0009584; P: detection of visible light; IEA: InterPro GO:0009649; P: entrainment of circadian clock; IEA: EnsemblPlants/Gramene GO:0009630; P: gravitropism; IEA: EnsemblPlants/Gramene GO:0009867; P: jasmonic acid mediated signaling pathway; IEA: EnsemblPlants/Gramene GO:0009640; P: photomorphogenesis; IEA: EnsemblPlants/Gramene GO:0015979; P: photosynthesis; IEA: EnsemblPlants/Gramene GO:0009638; P: phototropism; IEA: EnsemblPlants/Gramene GO:0018298; P: protein-chromophore linkage; IEA: UniProtKB-KW GO:0017006; P: protein-tetrapyrrole linkage; IEA: InterPro GO:0031347; P: regulation of defense response; IEA: EnsemblPlants/Gramene GO:0010029; P: regulation of seed germination; IEA: EnsemblPlants/Gramene GO:0006355; P: regulation of transcription, DNA-templated; IEA: UniProtKB-KW GO:0009409; P: response to cold; IEA: EnsemblPlants/Gramene GO:0010202; P: response to low fluence red light stimulus; IEA: EnsemblPlants/Gramene GO:0010374; P: stomatal complex development; IEA: EnsemblPlants/Gramene GO:0006351; P: transcription, DNA-templated; IEA: UniProtKB-KW GO:0010148; P: transpiration; IEA: EnsemblPlants/Gramene Interpro InterPro; IPR003661; EnvZ-like_dim/P InterPro; IPR003018; GAF InterPro; IPR029016; GAF_dom_like InterPro; IPR003594; HATPase_ATP-bd InterPro; IPR000014; PAS InterPro; IPR013654; PAS_2 InterPro; IPR013767; PAS_fold InterPro; IPR016132; Phyto_chromo_attachment InterPro; IPR013516; Phyto_chromo_BS InterPro; IPR001294; Phytochrome InterPro; IPR012129; Phytochrome_A-E InterPro; IPR013515; Phytochrome_cen-reg InterPro; IPR005467; Sig_transdc_His_kinase_core InterPro; IPR009082; Sig_transdc_His_kinase_dimeric Pfam SMART PROSITE PRINTS PR01033; PHYTOCHROME |