※ dbPPT Protein Information

TagContent
UniProt Accession
Theoretical PI
9.5 
Molecular Weight
198373.02 
Genbank Protein ID
Genbank Nucleotide ID
Protein Name
Retrotransposon protein, putative, unclassified 
Gene Name
LOC_Os03g01080 
Created Date
2006-08-22 
Organism
Oryza sativa subsp. japonica(Rice) 
NCBI Taxa ID
39947 
Phosphorylation Sites
Position
Peptide
Source
References
179
RGPDARLSIERRRNG
dbPPT, P3DB
[1, 2]
Functional Description
 
Sequence Annotation
Keyword
 
Sequence Source
UniProt 
Protein Sequence
MAERAVAHNH SPSASGDDGE QNPRRRARTP PPPSRRSLRR EEALEGVERS ATSPPTSDGE 60
GRRDGERCLL VYGDGSTPQG ALQAAGALLR HPPVVPDPET PARRWLDDVA DLVMTAQQRL 120
GAGGRSSATK ASGAATAGSV SSRRRARRAA AVTRRSSAIP SSTPPTQEDV RRGPDARLSI 180
ERRRNGRRAA HATEGASSSG APLRFGRGGQ PPVPPVGGVG CRAFVASLQN VRWPPRFRPT 240
ITEKYDGSVN PAEFLQVYTT GIEAAGGDDR VMANFFPMAL KGQARGWLMN LPPASVHSWE 300
DLCQQFTMNF QGTYPRPGEE ADLHAVQRRD DESLRSYIQR FCQVHNTIPC IPAHAVIYAF 360
RGGVRHNRML EKIASKEPQT TAELFQLADR VARKEEAWTW NSTGSGVAAS AAPGSAARSG 420
RRDRRRKKRS AHSDDEGHVL AVEGASRATR KGRPASDKKK EAGAPSRERP TGKWCTVHNT 480
SLHDLADCRA VKSLAERTRK WEEERRQERR EGKAPAAPSG NRRRFQEPRA TIATVDGGAC 540
AHACRRSLKA MKRELLAAAP THEATRRARW SEVALTFDQT DHPPCVARGG QIAMVVSPTV 600
CNVKLGRVLI DGGAALNILS PAAFDAIKAP GMVLRPSQPI IGVTPGHTWP LGHIDLPVTF 660
GGSANFRTER VNFDVADLSL PYNAVLGRPA LVKFMAAVHY AYLQMKMPGP GGPISVYGDL 720
KVALACMEQR ADHLAAASKP EGGNERLSTF VPAAPRQRMI TCDEVPEDAL VSFLRANADV 780
FAWRPADMPG VPREVIEHRL AVRPGARLVR QKVRRQAPER QAFIREEVAR LLEAGFIREV 840
LHPEWLANPV VVPKANGKLR MCIDYTDLNK ACPKDPYPLP RIDQIVDSTA GCDLLCFLDA 900
YSGYHQIRMA REDEEKTAFI TPIGTYCYTT MPFGLKNAGP TFQRTTRISL GSQIGRNVEA 960
YVDDLVVKTR NQETLLSDLA ETFESLRSAR IKLNPDKCVF GVPAGKLLGF LVVSAALVVE 1020
RDEDNPHPAH PHPVSTRPGR EQAGEAPESN GGPRPPTAGV GPPPACPTVP GTPDPQDGPG 1080
ATAGRPRLSP SDPEVVGTEA ECAPRGLSDE ERPRDAAPSE EDRPRRKAHR VTVVTSYPLG 1140
QILHNREGTG RVVKWAIEFS EFDLHFEPRH AIKSQALADF VAEWTPAPEP ISVPEASSGP 1200
SQLPHTAYWV MQFDGSLSLQ GAGAGVMLTS PNGDVLRYLV RLDFRATNNM AEYEGLLAGL 1260
RVAAGLGIRR LLVLGDSQLV VNQVSKEYQC SDPQMDAYVR QVRRMERHFD GIELRHVPRR 1320
DNAVADELSR LASSRAQTPP GAFEERLAQP SARPDPLGET DAPERPPRPV GVQASGPEGS 1380
VPGSPRLIAW ITEIQAYLAD KTLPEDREGS ERVRRISKRY VLVKGTVYWR AANGVLLKCI 1440
PREQGVELLA DVHEGECGAH STSRTLVGKA FRQGFYWPTA LNDAVDLVRR CRACQFHARQ 1500
THQLAQALQT IPLSWPFAVW GLDILGPFRR APGRFEYLYV AVDKFTKWPE AYPVIKIDKH 1560
STLKFIRGIT ARFRVPNRII TDNGTQFTSE LFGDYCEDMG IKLCFASPAH PRSNGQLERA 1620
NAEILKGLKT KTFNILKKHG DSWIEELPAV LWANRTTPSR ATGETPFFLV YGAEAVLPSE 1680
LTLRSPRATM YCEADQDQLR RDDLDYLQER RRRAALRAAR YQQSLRRYHQ RHVRARSLCV 1740
DDLVLRRVQT RAGLSKLSPM WEGPYRVIGV PRPGSVRLAT GDGTELPNPW NIEHLRRFYP 1800
 
Gene Ontology
GO:0003723; F: RNA binding; IEA: InterPro
GO:0003964; F: RNA-directed DNA polymerase activity; IEA: InterPro
GO:0004523; F: RNA-DNA hybrid ribonuclease activity; IEA: InterPro
GO:0015074; P: DNA integration; IEA: InterPro 
Interpro
InterPro; IPR001584; Integrase_cat-core
InterPro; IPR005162; Retrotrans_gag_dom
InterPro; IPR012337; RNaseH-like_dom
InterPro; IPR002156; RNaseH_domain
InterPro; IPR000477; RT_dom
Pfam
Pfam; PF03732; Retrotrans_gag
Pfam; PF00665; rve
Pfam; PF00078; RVT_1 
SMART
 
PROSITE
PS50994; INTEGRASE
PS50879; RNASE_H 
PRINTS