※ dbPPT Protein Information

TagContent
UniProt Accession
Theoretical PI
9.28 
Molecular Weight
201623.91 
Genbank Protein ID
Genbank Nucleotide ID
Protein Name
Retrotransposon protein, putative, unclassified 
Gene Name
LOC_Os12g41000 
Created Date
2006-01-24 
Organism
Oryza sativa subsp. japonica(Rice) 
NCBI Taxa ID
39947 
Phosphorylation Sites
Position
Peptide
Source
References
66
GGPDARISIERRRNG
dbPPT, P3DB
[1, 2]
Functional Description
 
Sequence Annotation
Keyword
 
Sequence Source
UniProt 
Protein Sequence
MTTRHRLGAG GRSSATKTSG AATTGYVSSR RRARRAAAVA RHSAATPSSA PPTQEDLRGG 60
PDARISIERR RNGRRAAHAT EGASSSGVSR QHGRGDQPSV PPVGGVGCRA FVASLRNVRW 120
PPRFRPTIAE KYDGSVNPAE FLQVYTTGIE AAGGDDRVMA NFFPMALKGQ ARGWLMNLPP 180
ASVHSWEDLC QQFTMNFQGT YPRPGEEADL HAVQRRDDES LRSYIQRFCQ GGVRHNRMLE 240
KIASKEPQTT AELFQLADRV ARKEEAWTWN PSGSGVAASA APGSAARTGR RDRRRKKRSA 300
HSDDEGHVLA VEGASRATRK GRPASDKKKE AGAPSRERPT GKWCIVHNTS LHDLADCRAV 360
KSLAERTRKW EEERRQERRE GKSPAVPSGN RRSEAKQKAP AEDIDDGDDD LGFQEPGATI 420
ATVDGGACAH VSRRSLKAMK RELRAAAPTH EATRRARWSE VSLTFDQTDH PPCIARGGQI 480
AMVVSPTVCN VKLGRVLIDG GAALNILSPA AFDAIKAPGM VLRPSQPIIG VTPGHTWPLG 540
HIDLPVTFGG SANFRTERMK MPGPGGPISV HGDLKVTLSC MEQRADHLTA ASKPEGGDER 600
LGTSAPAAPR QRIVTCDEVP EDALVSFLRA NADVFAWRPA DMPGVPREVI EHRLAMRSGA 660
RPVRQKVRRQ VPERQAFIRE EVARLLEAGF IREVIHPEWL ANPVVVPKAN GKLRMCIDYT 720
DLNKACPKDP YPLLRIDQIV DSTAGEDEEK TAFITPIGTY CYTTMPFGLK NAGPTFQRTT 780
RISLGSQIGR NVEAYVDDLV VKTRNQETLL SDLAETFESL RSARIKLNPD KCVFGVPAGK 840
LLGFLVSARG IEANPEKIRA IERMRPPSKL RDVQCVTGCM AALSRFISRL GEKALPLFKL 900
LKRSGLFTWT EEAERALTQL KAYLSSPLVL VAPEPNEPLL LYLAATPQVV SAALVVERDE 960
DNPHSAHPHP VLAWPRREQG GEAPEPNGGP RPPTTGAGPL PACQTVPGAP DPQDGPRATA 1020
GRPHLSPSDP EANPVPTRPG REQGEEAPEP NGGLRPLTTG VGPLPACPTT PGAPDPQDGP 1080
EATVGRPPLS SSDPEVVGTE DECTPRGRLD KERPRDVAPS EEDRPHRKVQ WPVYFVSEAL 1140
RDAKTRYPQA QKMLYAILMA SRKLRHYFQA HRVTVVTSYP LGQILHNREG TGRVVKWAIE 1200
LSEFDLHFEP CHAIKSQALA DFVAEWTPAP EPVSVPEASS GPSQLPHTAH WGAGAGVTLT 1260
SPSGDVLRYL VRLDFRATNN MAEYEGLLAG LRVAAGLGIR RLLVLGDSQL VVNQVCKEYR 1320
CSDPQMDAYV RQVRRMERHF DGIELRHVPR RDNTVADELS RLASSRAQTP PGAFEERLVQ 1380
PSARPDPLGE TDAPDRPPMP VEVQASGPEG SAPSSLRLIA WIAEIQAYLT DKTLPEDCEG 1440
SERVQRISKR YVLVEGTLYR RAANGILLKC IPREQGVELL ADIHEGECGA HSASRTLVGK 1500
AFRQGFYWPT ALNDAVDLVR RCRACQFHAK QIHQPAQALQ IIPLSWPFAV WGLDILGPFR 1560
RAPGGFEYLY VAIDKFTKWP EAYPVVKIDK HSALKFIKGI TARFGVPNRI ITDNGTQFTS 1620
ELFGDYCEDM GIKLCFASPA HPRSNGQVER ANAEILRGLK TKTFNILKKH GDSWIEELPA 1680
VLWANRTTPS RATGETPFFL VYGAEAVLPS ELTLRSPRAT MYCEADQDQL RRNDLDYLEE 1740
RRRRAALRAA RYQQSLRRYH QRHVRARSLC VDDLVLRRVQ TRAGLSKLSP MWEGPYRVIG 1800
VPRPGSVQLA TGDGTELPNP WNIEHLRRFY P 1831 
Gene Ontology
GO:0003723; F: RNA binding; IEA: InterPro
GO:0003964; F: RNA-directed DNA polymerase activity; IEA: InterPro
GO:0004523; F: RNA-DNA hybrid ribonuclease activity; IEA: InterPro
GO:0015074; P: DNA integration; IEA: InterPro 
Interpro
InterPro; IPR001584; Integrase_cat-core
InterPro; IPR005162; Retrotrans_gag_dom
InterPro; IPR012337; RNaseH-like_dom
InterPro; IPR002156; RNaseH_domain
InterPro; IPR000477; RT_dom
Pfam
Pfam; PF03732; Retrotrans_gag
Pfam; PF00665; rve
Pfam; PF00078; RVT_1 
SMART
 
PROSITE
PS50994; INTEGRASE
PS50879; RNASE_H 
PRINTS