※ dbPPT Protein Information

TagContent
UniProt Accession
Theoretical PI
9.22 
Molecular Weight
210532.19 
Genbank Protein ID
Genbank Nucleotide ID
Protein Name
Retrotransposon protein, putative, unclassified 
Gene Name
LOC_Os12g40810 
Created Date
2006-01-24 
Organism
Oryza sativa subsp. japonica(Rice) 
NCBI Taxa ID
39947 
Phosphorylation Sites
Position
Peptide
Source
References
124
GGPDARISIERRRNG
dbPPT, P3DB
[1, 2]
Functional Description
 
Sequence Annotation
Keyword
 
Sequence Source
UniProt 
Protein Sequence
MAEQAKAHNL SPSVSGDDGE PNPRRRARTP PPPPRHPPIV PDPESPAQRW LDDVANLVMT 60
ARQRLGASGR SSATKTSGAA TTGSVSSRRR ARRAAAVARH SAATPSSAPP TQEDLRGGPD 120
ARISIERRRN GRRAAHATEG ASSSGVSHQH GRGDQPSVPP VGGVGCRAFV ASLRNVRWPP 180
RFRPTIAEKY DGSVNPAEFL QVYTTGIEAA GGDDRVMANF FPMALKGQAR GWLMNLPPAS 240
VHSWEDLCQQ FTMNFQGTYP RLGEEADLHA VQRRDDESLR SYIQRFCQVR NTIPCIPAHA 300
VIYAFRGGVR HNRMLEKIAS KEPQTTAELF QLADRVARKE EAWTWNPSGS GVAASAAPGS 360
AARTGRRDRR RKKRSAHSDD EGHVLAVEGA SRATRKGRPA SDKKKEAGAP SRERPTGKWC 420
IVHNTSLHDL ADCRAVKSLA ERTRKWEEER RQERREGKSP AVPSGNRRSE AKQKAPTEDI 480
DDGDDDLGFQ EPGATIATVD GGACAHVSRR SLKAMKRELL AAAPTHEATR RARWSEVALT 540
FDQTDHPPCV ARGGQIAMVV SPTVCNVKLG RVLIDGGAAL NILSPAAFDA IKAPGMVLRP 600
SQPIIGVTPG HTWPLGHIDL PVTFGGSANF RTERVNFDVA DLSLPYNAVL GRPALVKFMA 660
AVHYAYLQMK MPGPGGPISV HGDLKVALAC MEQRADHLTA ASKPEGGDER LGTSAPAAPR 720
QRIVTCDEVP EDALVSFLRA NADVFAWRPA DMPGVPREVI EHRLAVRSGA RPVRQKVRRQ 780
APERQAFIRE EVARLLEAGF IREVIHPEWL ANPVVVPKAN GKLRMCIDYT DLNKACPKDP 840
YPLPRIDQIV DSTAGCDLLC FLDAYSGYHQ IRMTREDEEK TAFITPIGTY CYTTMPFGLK 900
NAGPTFQRTT RISLGSQIGR NVEAYVDDLV VKTHNQETLL SDLAETFESL RSARIKLNPD 960
KCVFGVPAGR LLGFLVSARG IEANPEKIRA IERMRPPSKL RDVQCVTGCM AALSRFISRL 1020
GEKALPLFKL LKRSGPFTWT EEAERALTQL KAYLSSPPVL VAPEPNEPLL LYLAATPQVV 1080
SAALVVERDE DNPHSAHPHP VLAWPGREQG GEAPEPNGGP RPPTTGAGPL PACQTVPGAP 1140
DPQDGPEATV GRPPLSSSDP EVVGTEDECT PRGRLDKEHP RDVAPSEEDR PHRKVQRPVY 1200
FVSEALRDAK TRYAQAQKML YAILMASRKL RHYFQAHRVT VVTSYPLGQI LHNREGTGRV 1260
VKWAIELSEF DLHFEPRHAI KSQALADFVA EWTPAPEPVS VPEASSGPSQ LPHTAHWVMQ 1320
FDSSLSLQGA GAGVTLTSPS GDVLRYLVRL DFRATNNMAE YEGLLAGLRV AAGLGIRRLL 1380
VLGDSQLVVN QVCKEYRCSD PQMDAYVRQV RRMERHFDGI ELRHVPRRDN TVADELSRLA 1440
SSRAQTPPGA FEERLAQPSA RPDPLGETDA PDRPPMPVGV QASGPEGSAP SSLRLIAWIA 1500
EIQAYLTDKT LPEDREGSER VQRISKRYVL VEGTLYRRAA NGILLKCIPQ EQGVELLADI 1560
HEGECGSHSA SRTLVGKAFR QGFYWPTALN DAVDLVRRCR ACQFHAKQIH QPAQALQIIP 1620
LSWPFAVWGF DILGPFRQAP GGFEYLYVAI DKFTKWPEAY PVVKIDKHSA LKFIKGITAR 1680
FGVPNRIITD NGTQFTSELF GDYCEDMGIK LCFASPAHPR SNGQVERANA EILRGLKTKT 1740
LNILKKHDDS WIEELPAVLW ANRTTPSRAT GETPFFLVYG AEAVLLSELT LRSPRATMYC 1800
EADQDQLRRD DLDYLEERRR RAALRAARYQ QSLRRYHQHH IRARSLCVDD LVLRRVQTRA 1860
GLSKLSPMWE GPYRVIGVPR PGSVRLATGD GTELPNPWNI EHLRRFYP 1908 
Gene Ontology
GO:0003723; F: RNA binding; IEA: InterPro
GO:0003964; F: RNA-directed DNA polymerase activity; IEA: InterPro
GO:0004523; F: RNA-DNA hybrid ribonuclease activity; IEA: InterPro
GO:0015074; P: DNA integration; IEA: InterPro 
Interpro
InterPro; IPR001584; Integrase_cat-core
InterPro; IPR005162; Retrotrans_gag_dom
InterPro; IPR012337; RNaseH-like_dom
InterPro; IPR002156; RNaseH_domain
InterPro; IPR000477; RT_dom
Pfam
Pfam; PF03732; Retrotrans_gag
Pfam; PF00665; rve
Pfam; PF00078; RVT_1 
SMART
 
PROSITE
PS50994; INTEGRASE
PS50879; RNASE_H 
PRINTS