※ dbPPT Protein Information
| Tag | Content | ||||||||||||||||||||||||||||||
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UniProt Accession | |||||||||||||||||||||||||||||||
Theoretical PI | 8.92 | ||||||||||||||||||||||||||||||
Molecular Weight | 203278.65 | ||||||||||||||||||||||||||||||
Genbank Protein ID | |||||||||||||||||||||||||||||||
Genbank Nucleotide ID | |||||||||||||||||||||||||||||||
Protein Name | Retrotransposon protein, putative, Ty3-gypsy subclass | ||||||||||||||||||||||||||||||
Gene Name | LOC_Os12g34090 | ||||||||||||||||||||||||||||||
Created Date | 2006-01-24 | ||||||||||||||||||||||||||||||
Organism | Oryza sativa subsp. japonica(Rice) | ||||||||||||||||||||||||||||||
NCBI Taxa ID | 39947 | ||||||||||||||||||||||||||||||
Phosphorylation Sites |
Functional Description Sequence Annotation Keyword Sequence Source UniProt Protein Sequence MDEVGRRWTF SRANEGYTSC GPMAGSVTRR GLHMTGFVLE LRGMCVVLGY PHGVDYQARP 60 LPEQEGEDAE PHAGWEVTAV ILSGSPERTS LAVTAGGDSF PAACQNAALL AIGTLHQRYP 120 DELQHSPYRY HPRRGGARDY ATFRDASSED DATVVHLARM VEAYDAARID FHQMVSRGMV 180 ENNLKILELR QENLQLKKDL DALEAQLHQL KIAQGEICRP KRRRVCRSQK ITARKSTSRP 240 ELVRQSLAWT CFVETPRAEP APVVPQEGEA SGVGSSEAPS LFAGSGWGFQ MVTTRRNVNT 300 GEGNQPEGSN PNHQGNPPPP PPPDTNAILT QILAQQANMM NAFLHHLQNP PQQNAPPPPP 360 QHSKLAEFLR IRPPTFSSSN NPVDALDWLH AVGKKLDTVQ CSDEEKVIFA AHQLQGPASL 420 WWDHFQATQP EGQPITWARF TAAFRKTHVP AGVVALKKRE FRELKQGNRS VMEYLHEFNN 480 LARYAPEDVR EDEEKQEKFL AGMDPELSVR LVSGDYPDFQ RLVDKSIRLE AKHKELESHK 540 RRLANFRNQQ GANQRVRYTN PYPGGSSSQQ QQQQQQPRPA PRPQFVVRVP QQQQQQNQQG 600 TRAPRPPTPA GQPVQGRRDA SGPQRLCFNC FEPGHFADKC PKPRRQQGQA PPRPNNGGQD 660 VIRGRVNHVT AEDVLTTPDV IVGTFLVHSI PATILFDSGA SHSFISVPFV GRNQLGVERL 720 RNPLLITTPG GVMTAKYYSP AVPIEIQGIP FPSDLILLDT KNLDVILGMN WLAQFQGVVD 780 CARRTVTLYR GPEQPVVFFA PPTSVRSSEL QQIGLSEIPI VREFGDVFPE ELPGMPPKRE 840 IEFRIDLAPG TTPLYKRPYR MAANELAEVK KQLEELKEKG YIRPSTSPWG APVIFVEKKD 900 KTKRMCVDYR ALNEVTIKNK YPLPRIDDLF DQLKGATVFS KIDLRSGYHQ LRIREEDIPK 960 TAFTTRYGLY EFTVMSFGLT NAPAFFMNLM NKVFMEYLDK FVVVFIDDIL IYSQSEEDHQ 1020 HHLRLVLGKL REHQLYAKLS KCEFGLSEVK FLGHVISAKG VAVDPETVTA VTDWKQPKTV 1080 TQIRSFLGLA GYYRRFIENF SKIARPMTQL LKKEEKFVWS PQCEKAFQTL KEKLVSSPVL 1140 ILPDTRKDFM VYCDASRQGL GCVLIQDGHV VAYASRQLRP HEGNYPTHDL ELAAVVHALK 1200 IWRHYLIGNR CEIYTDHKSL KYIFTQSDLN LRQRRWLELI KDYDVGIHYH PGKANVVADA 1260 LSRKSHCNTL NVRGIPPELN QQMEALNLSI VGRGFLAALE AKPTLLDQIR EAQKNDPDMH 1320 GLLKNMKQGK AAGFTEDEHG TLWNGKRVCV PDSRELKQLI LQEAHESPYS IHPGSTKMYL 1380 DLKEKYWWVS MKREIAEFVA LCDVCQRVKA GHQRPAGLLQ PLQVPEWKWD EIGMDFITGL 1440 PKTQGGYDSI WVIVDRLTKV ARFIPVKTTY GGNKLAELYF ARIVSLHGIP KKIVSDRGSQ 1500 FTSHFWKKLQ EELGTRLNFS TAYHPQTDGQ TERLNQILED MLRACVLDFG KTWDKSLPYA 1560 EFSYNNSYQA SIQMAPYEAL YGRKCRTPLL WDQVGESQVF GTDILREAEA KVRIIRDNLK 1620 VAQSRQKSYA DNRRRDLEFA VDDFVYLRVT PLRGVHRFQT KGKLAPRYVG PFRITARRGE 1680 VAYQLELPAS LGNVHDVFHV SQLKKCLRVP SEQADSEQIE VREDLTYVER PVKILDTMER 1740 RTRNRVIRFC KVQWSNHAEE EATWEREDEL KAAHPDLFAS SSESRGRDSV 1790 Gene Ontology GO:0003723; F: RNA binding; IEA: InterPro GO:0003964; F: RNA-directed DNA polymerase activity; IEA: InterPro GO:0008270; F: zinc ion binding; IEA: InterPro GO:0015074; P: DNA integration; IEA: InterPro Interpro InterPro; IPR023780; Chromo_domain InterPro; IPR016197; Chromodomain-like InterPro; IPR001584; Integrase_cat-core InterPro; IPR021109; Peptidase_aspartic_dom InterPro; IPR005162; Retrotrans_gag_dom InterPro; IPR012337; RNaseH-like_dom InterPro; IPR000477; RT_dom InterPro; IPR013242; RVP_2 InterPro; IPR001878; Znf_CCHC Pfam SMART SMART; SM00343; ZnF_C2HC PROSITE PRINTS |