※ dbPPT Protein Information

TagContent
UniProt Accession
Theoretical PI
9.02 
Molecular Weight
217194.58 
Genbank Protein ID
Genbank Nucleotide ID
Protein Name
Retrotransposon protein, putative, unclassified 
Gene Name
LOC_Os12g26240 
Created Date
2006-01-24 
Organism
Oryza sativa subsp. japonica(Rice) 
NCBI Taxa ID
39947 
Phosphorylation Sites
Position
Peptide
Source
References
179
GEPDARISIERRRNG
dbPPT, P3DB
[1, 2]
Functional Description
 
Sequence Annotation
Keyword
 
Sequence Source
UniProt 
Protein Sequence
MAEPAKAHDL SPSMSGDDGE PNPRRRARTP PPPPRQSPRR EKALERAEGS ATSTPTGGGE 60
GRRDGERRLL VYGDGSTPQG ALQAAGALLR HPPVAHNPES PAQRWLDDVA KLVMTARQRL 120
DAGGRSSATK ASGAATTGSA SSRRRARRAA AAVRHSAATP SSTPPTREDL RGEPDARISI 180
ERRRNGRRAP HATEGASSSG VSPHHGRGDQ PSVPPVGGVG CRAFVASLRN VRWPPRFRPT 240
IAEKYDGSVN PAEFLQVYTT GIEAAGGDDR VMANFFPMAL KGQARGWLMN LPPASVHSWE 300
DLCQQFTMNF QGTYPRPGEE ADLHAVQRRD DESLRSYIQR FCQVRNTIPC IPAHAVIYAF 360
RGGVRHNRML EKIASKEPQT TAELFQLADR VARKEEAWTW NPSGSGVAAS AAPGSAAQIG 420
RRDRRRKKRS AHTDDEGHVL AVEGASRATR KGRPAGGKKN EAGAPNRERP TGKWCTVHNT 480
SLHDLADCRA VKSLAERTRK WEEERRQERR EGKSPAVPSG NRRSEAKQKA PAEDIDDGDD 540
DLGFQEPGAT IATVDGGACA HVSRRSFKAM KRELLAAAPT HEATCQARWS EIALTFDQTD 600
HPPCVARGGQ IAMVVSPTVC NVKLGRVLID GGAALNILSP AAFDAIKAPG MVLRPSQPII 660
GVTPGHTWPL GHIDLPVTFG GSANFRTERV NFGVADLSLP YNAVLGRPAL VKFMAAVHYA 720
YLQMKMPGPG GPISVHGDLK VALACLEQRA DHLAAASKPE GGDERLGASA PATPRQRMIT 780
GDEVPVKEVA LGDGPSKTTR IGDMPGVPRE VIEHRLAVRP GARPVRQKVR RQAPERQAFI 840
REEVARLLEA GLIREVIHPE WLANPVVVPK ANGKLRMCID YTDLNKACPK DPYPLPRIDQ 900
IVDSTVGCDL LCFLDAYSGY HQIRMAREDE EKTAFITPIG TYCYTTMPFG LKNAGPTFQR 960
TTRISLGNQL GRNVEAYVDD LVVKTRNQEM LLLDLAETFE SLRSARIKLN PDKCVFGVPA 1020
GKLLGFLVSA RGIEANPEKI RAIERMRPPS KLRDVQCVTG CMAALSRFIS RLGEKALPLF 1080
KLLKRSGPFT WTEDAENALT QLKAYLSSPP VLVARELDEP LLLYLAATPQ VVSAALVVER 1140
DENNSHFTLP HPVPTWPGRE QGGEAPEPNG GPWPPTTGVG PLPACQMVLG APDPQEGPEA 1200
TVGRPHLSPF DPEANPVLTR PGKEQGEEAP EPNGGLRPLT TGVGPLPAFP TTPGAPDPQD 1260
GPEATVGRPP LLSSDPEVIS TEDKCAPRGC LDEECPRDAA PSEEDRPHRK AHRVTVVTSY 1320
PLGQILHNRE GTGRVVKWAI ELSEFDLHFE PRHAIKSQAL ADFVAEWTPA PEPVSIPEAS 1380
TDPSQLPHTA HWVMQFDGSL SLQGAGAGVT LTSPSGDVLR YLVRLDFRAT NNMAECEGLL 1440
AGLRVAAGLG IRRLLVLGDS QLVVNQVCKE YRCSDPQMDA YVRQVRRMER HFDGIELRHV 1500
PRRDNMIADE LSRLASSRAQ TPPGAFEERL AQPSARPDPL GETDAPDRPP RPVGVQASGP 1560
EGSAPNSLRL IAWIAEIQAY LTDKTLPEDC EGSERVHRIS KRYVLVEGTL YRRAANGILL 1620
KCIPREQGVV LLADIHEGEC GAHSASRTLV GKAFRQGFYW PTALNDAVDL VRRCRACQFH 1680
AKQIHQPAQA LQTIPLSWPF AVWGLDILGP FRRASGGFEY LYVAIDRFTK WPEAYPVVKI 1740
DKHSALKFIK GITARFGVPN RIITDNGTQF TSELFGDYCE DMSIKLCFAS PAHPRSNGQV 1800
ERANAEILKG LKTKTFNILK KHGDSWIEEL PAVLWANRTT PSRATGETPF FLVYGAEAVL 1860
PSELTLRSPR ATMYCEADQN QLRRDDLDYL EERRRHAAFR AARSQQSLRR YHQRHVQARS 1920
LCVDDLVLRR VQTRAGLSKL SPMWEGPYRV VGVPRPGSIR LATGDGTELP NPWNIEHLRR 1980
FYP 1983 
Gene Ontology
GO:0003723; F: RNA binding; IEA: InterPro
GO:0003964; F: RNA-directed DNA polymerase activity; IEA: InterPro
GO:0004523; F: RNA-DNA hybrid ribonuclease activity; IEA: InterPro
GO:0015074; P: DNA integration; IEA: InterPro 
Interpro
InterPro; IPR001584; Integrase_cat-core
InterPro; IPR005162; Retrotrans_gag_dom
InterPro; IPR012337; RNaseH-like_dom
InterPro; IPR002156; RNaseH_domain
InterPro; IPR000477; RT_dom
Pfam
Pfam; PF03732; Retrotrans_gag
Pfam; PF00665; rve
Pfam; PF00078; RVT_1 
SMART
 
PROSITE
PS50994; INTEGRASE
PS50879; RNASE_H 
PRINTS