※ dbPPT Protein Information

TagContent
UniProt Accession
Theoretical PI
9.21 
Molecular Weight
198144.01 
Genbank Protein ID
Genbank Nucleotide ID
Protein Name
Retrotransposon protein, putative, unclassified 
Gene Name
LOC_Os12g04050 
Created Date
2006-01-24 
Organism
Oryza sativa subsp. japonica(Rice) 
NCBI Taxa ID
39947 
Phosphorylation Sites
Position
Peptide
Source
References
66
GGPDARISIERRRNG
dbPPT, P3DB
[1, 2]
Functional Description
 
Sequence Annotation
Keyword
 
Sequence Source
UniProt 
Protein Sequence
MTARQRLGAG GRSSATKTSG AATTGSVSSR RRARRAAAVA RHSAATPSSA PPTQEDLRGG 60
PDARISIERR RNGRRAAHAT EGASSSGVSH QHGRGDQPSV PPVGGVGCRA FVASLRNVRW 120
PPRFRPTSAE KYDGSVNPAE FLQVYTTGIE AAGGDDRVMA NFFPMALKGQ ARGWLMNLPP 180
ASVHSWEDLC QQFTMNFQGT YPRPGEEADL HAVQRRDDES LRSYIQRFCQ VRNTIPCIPA 240
HAVIYAFRGG VRHNRMLEKI ASKEPQTTAE LFQLADRVAR KEEAWNWNPS GSDVAASAAP 300
GSAARTGRRD RRRKKRSAHS DDEGHVLAVE GASRATRKGR PASDKKKEAG APSRERPTGK 360
WCIVHNTSLH DLADCRAVKS LAERTRKWEE RRQERREGKS PAVPSGNRRS EAKQKDPAED 420
IDDGDDDLGF QEPGATIATV DGGACAHVSH RSLKAMKREL LAAAPTHEAT RRARWSEVAL 480
TFDQTDHPPC VARGGQIAMV VSPTVCNVKL GRVLIDGGAA LNILSPAAFD AIKAPGMVPR 540
PSQPIIGVTP GHTWPLGHID LPVTFGGSAN FRTERVNFDV ADLSLPYNAV LGRPALVKFM 600
AAVHYAYLQM KMPGPGGPIS VHGDLKVALA CMEQRADHLT AASKPEGGDE RLGTSAPAAP 660
RQRIVTCDEV PEDALVSFLR ANADVFAWRP ADMPGVPREV IEHRLAVRSG ARPVRQKVRR 720
QAPERQAFIR EEVARLLEAG FIREVIHPEW LANPVVVPKA NGKLRMCIDY TDLNKACPKD 780
PYPLPRIDQI VDSTAGCDLL CFLDAYSSYH QIRMAREDEE KTAFITPIGT YCYTTMPFGL 840
KNAGPTFQRT TRISLGSQIG RNVEAYVDDL VVKTRSQETL LSDLAETFES LRSARIKLNP 900
DKCVFGVPAG KLLGFLVSAR GIEANPEKIR AIERMRPPSK LRDVQCVIGC MAALSRFISR 960
LGEKALPLFK LLKRSGPFTW TEEAERALTQ LKAYLSSPPV LVAPEPNEPL LLYLAATPQV 1020
VSAALVVERD EDNPHSAHPH PVLAWPGREQ GGEAPEPNGG PRPPTTGAGP LPACQTVPGA 1080
PDPQDGPRAT AGRPHLSPSD PEANPVPTRP GREQGEEAPE PNGGLRPLTT GVGPLPACPT 1140
TPGAPDPQDG PEATVGRPPL SSSDLEVVGT EDECTPEALR DAKTRYPQAQ KMLYAILMAS 1200
RKLRHYFQAH RVTVVTSYPL GQILHNREGN GRVVKWAIEL SEFDLHFEPR HAIKSQALAD 1260
FVAEWTPAPE PVSVPEASSG PSQLPYTAHW VMQFDGSLSL QGAGAGVTLT SPSGDVLRYL 1320
VRLDFRATNN MAEYEGLLAG LRVAAGLGIR RLLVLGDSQL VVNQVCKEYR CSDPQMDAYV 1380
RQVRCMERHF DGIELRHVPR RDNTVADELS RLASSRAQTP PGAFEERLAQ PSARPHPLGE 1440
TDAPDRPPMP VGVQASGPEG SAPSSLRLIA WIAEIQAYLT DKTLPRTAKG VNASSASPNA 1500
TACQFHAKQI HQPAQALQII PLSWPFAVWG LDILGPFRRA PGGFEYLYVA IDKFTKWPEA 1560
YPVVKIDKHS ALKFIKGITA RFGVPNRIIT DNGTQFTSEL FGDYCEDMGI KLCFASPAHP 1620
RSNGQVERAN AEILRGLKTK TFNILKKHGD SWIEELPAVL WANRTTPSRA TGETPFFLVY 1680
GAEAVLPSEL TLRSPRATMY CEADQDQLRR DDLDYLEERR RRAALRAARY QQSLRRYHQR 1740
HVRARSLCVD DLVLRRVQTR AGLSKLSPMW EGPYRVIGVP RAGSVRLATG DGTELPNPWN 1800
IEHLRRFYP 1809 
Gene Ontology
GO:0003723; F: RNA binding; IEA: InterPro
GO:0003964; F: RNA-directed DNA polymerase activity; IEA: InterPro
GO:0004523; F: RNA-DNA hybrid ribonuclease activity; IEA: InterPro
GO:0015074; P: DNA integration; IEA: InterPro 
Interpro
InterPro; IPR001584; Integrase_cat-core
InterPro; IPR005162; Retrotrans_gag_dom
InterPro; IPR012337; RNaseH-like_dom
InterPro; IPR002156; RNaseH_domain
InterPro; IPR000477; RT_dom
Pfam
Pfam; PF03732; Retrotrans_gag
Pfam; PF00665; rve
Pfam; PF00078; RVT_1 
SMART
 
PROSITE
PS50994; INTEGRASE
PS50879; RNASE_H 
PRINTS