※ dbPPT Protein Information

TagContent
UniProt Accession
Theoretical PI
8.43 
Molecular Weight
153430.88 
Genbank Protein ID
Genbank Nucleotide ID
Protein Name
Retrotransposon protein, putative, Ty3-gypsy sub-class; Retrotransposon protein, putative, Ty3-gypsy subclass 
Gene Name
LOC_Os11g09300 
Created Date
2005-05-24 
Organism
Oryza sativa subsp. japonica(Rice) 
NCBI Taxa ID
39947 
Phosphorylation Sites
Position
Peptide
Source
References
1210
DAEAEKITRKAKICC
dbPPT, P3DB
[1, 2]
Functional Description
 
Sequence Annotation
Keyword
Complete proteome,Reference proteome 
Sequence Source
UniProt 
Protein Sequence
MPISAGPSMT GNENAVDTTQ DDSLSKDPPA EAENRTLTTS ELEKDSNAAK PCRSDKSHEP 60
TRITSEATRS WCPIHKTRKH TLHACWVFLN VRAEIRACKE RGIQRISPTC DVYCPIHKTK 120
NHDLSSCKVF LSATMTSSPK VQQLGISLRD EDKEQGTTLV SDRFVGIIDI SSPEPSVLHL 180
LEDYGSSKRV RRARFRPGAI EKYDGSTDPE EFLQVYSTVL YAARADDNAL ANYLPTALKG 240
SARSWLMHLP PYSISSCADL CQQFIANFQG TYKRHAIEDD LHALTQNSGE SLREYVRRFN 300
ECRNTIPEIT DASVICAFKS GVRDRYTTQE LVTRRITTTR RLFEIVERCA HADDALRRKN 360
DKPKTGGEKK PATDAPESSK KKNRKSGKMK AQAEVLAAEY ANPPKRPDPQ GSDTKKAWCP 420
IHKIDRHSLE DCLVFKKSLE KHMAFEKGKR VRVVEKDAEV APQESDTAYP DSNLHVSHIF 480
GGSTAYSSKR EYKKVEREVC STWQGAAHKM KWSEQKIEFS EEDHPKTAVI PGRYPIVVEP 540
TIRNIKVAWV LIDGGSSINL LFASALDAMG ISRSELTPTD QSFHGITPQS SSKPLGKITL 600
PVTFGQANNF RMEQITFDVA EFDTAYNAII GRTALAKFMA TSHYAYQVLK MPGPKGTITI 660
QGNTKLAVQC DKWSLDMVEQ MPSPPATTEP PKKEFVLITF LRDNADVFAW QPSDMPRVPR 720
EVIEHKLMVR PDAKPVKQKL RRFAPDQKQA IREELDKLLK AGFIREVLHP EWLANPVMVR 780
KANEKWRMCV DFTDLNKACP KDHFPLPRID QLVDSTAGCE LLSFLDAYSG YHRISMAKED 840
GEKTAFITPF GGALSDQLGN NVEAYVDDIV VKTKTSDSLI DDLRETFDNL RRYRLMLNPE 900
KCTFGVPSGK LLGFLVSGRG IEANPEKIKA IENKKSPTRL KEVQKLTGCM VALSRKLRHY 960
FQAHRVTVVS SFHLGEVVRN KDVVGRIAKW VVELSQFDVH FVPRTAIKSQ VLADFAADWT 1020
MPDNKSDNQI DNETWTMAFD GALNSQGAGA GFILTSPSGD QFKHAIHLNF RATNNTAEYE 1080
GLLAGIRAAA ALGVKRLIVK GDSELVANQV HKDYKCSNPE LSKYLAEVRK LEKRREPLEP 1140
GTFLDILTKP SVKEVSGEVS PAAPNISSEA TEAEHAVADI ETTDDWRTPL IKFINSEELP 1200
EDDAEAEKIT RKAKICCMIG NDLYKKAPNG VLLKCVSSDD GRHLLLDIHE GICGSHAAGR 1260
TLVGKAFRQG FFWPTAIKDA CDMVQRCEAC QFHNILGPFP RGQGGYRFLF VAIDKFTKWI 1320
EAVPTGEIKA DNAIKFIKGI FCRYGLPHRI ITDNGSQFIS ADFHDYCIGL GV 1372 
Gene Ontology
GO:0003723; F: RNA binding; IEA: InterPro
GO:0003964; F: RNA-directed DNA polymerase activity; IEA: InterPro
GO:0004523; F: RNA-DNA hybrid ribonuclease activity; IEA: InterPro
GO:0015074; P: DNA integration; IEA: InterPro 
Interpro
InterPro; IPR001584; Integrase_cat-core
InterPro; IPR005162; Retrotrans_gag_dom
InterPro; IPR012337; RNaseH-like_dom
InterPro; IPR002156; RNaseH_domain
InterPro; IPR000477; RT_dom
Pfam
Pfam; PF03732; Retrotrans_gag
Pfam; PF00665; rve
Pfam; PF00078; RVT_1 
SMART
 
PROSITE
PS50994; INTEGRASE
PS50879; RNASE_H 
PRINTS