※ dbPPT Protein Information

TagContent
UniProt Accession
Theoretical PI
8.59 
Molecular Weight
158379.67 
Genbank Protein ID
Genbank Nucleotide ID
Protein Name
Putative rice retrotransposon retrofit gag/pol polyprotein 
Gene Name
B1065G12.28 
Created Date
2002-06-01 
Organism
Oryza sativa subsp. japonica(Rice) 
NCBI Taxa ID
39947 
Phosphorylation Sites
Position
Peptide
Source
References
93
LVLGYLLSSLSRDVL
dbPPT, P3DB
[1, 2]
Functional Description
 
Sequence Annotation
Keyword
 
Sequence Source
UniProt 
Protein Sequence
MASSSSSSGT AAANLLQGHS VSEKLGKANH ALWKAQVSAA VHGARLLGYL NGDIKAPNAE 60
ISVTIDGKTT TKPNPAFEDW EANDQLVLGY LLSSLSRDVL IQVATCKTAA EAWRNIEALY 120
STGTRARAVN TRLALTNTKK GTMKIAEYVA KMRALCDEMA AGGRPLDEEG LVQYIIAGLN 180
EDFSPIVSNL CNKSDPITVG ELYSQLVNFE TLLDLYRSTG QGGAAFVANR GRGGGGGGGR 240
GNNNNSDGGG GGGGRGAPRG RGGGGQGRGG HGRGTGGQDR RPTCQVCFKR GHTAADCWYR 300
FDEDYVADEK LVAAATNSYG IDTNWYIDTG ATDHITGELE KLTTKEKYNG GEQIHTASGA 360
GMDISHIGHT IVHTPSRNIH LNNVLYVPQA KKNLISASQL AADNSAFLEL HSKFFSIKDQ 420
VTRDVLLEGK CRHGLYPIPK SFGRSTNKQA LGAAKLSLSR WHSRLGHPSL PIVKQVISRN 480
NLPCSVESVN QSVCNACQEA KSHQLPYIRS TSVSQFPLEL VFSDVWGPAP ESVGRNKYYV 540
SFIDDFSKFT WIYLLKYKSE VFEKFKEFQA LVERMFDRKI IAMQTDWGGE YQKLNSFFAQ 600
IGIDHHVSCP HTHQQNGSAE RKHKHIIEVG LSLLSYASMP LKFWDEAFVA ATYLINRIPS 660
KTIQNSTPLE KLFNQKPDYS SLRVFSCTCW PHLHPYNTHK LQFRSKQCVF LGFSTHHKGF 720
KFLDVSSGRV YISRDVVFDE NVFPFSTLHS NAGARLRSEI LLLPSPLTNY NTVSAGGTHI 780
VAPVANTPLP SDNLISNAAD VTSGENSAAH EQEMENEQEI ENVMHGNDVH GDAASGPVLD 840
QPTADSSTAP DQGANTSDAV SGAASDAGGD TATLGAGAAN GAAAGGEESQ PVPPDVTGTV 900
AATVAPASRP HTRLRSGIRK EKVYTNGTVK YGCFSSTGEP QNDKEALGDK NWRDAMETEY 960
NALIKNDTWH LVPYEKGQNI IGCKWVYKVK RKADGTLDRY KTRLIAKGFK QRYGIDYEDT 1020
FSPVVKAATI RIILSIAVSR GWSLRQLDVQ NDFLHGFLEE EVYMQQPPGF ESSSKPDYVC 1080
KLNKALYGLK QAPRAWYSRL SKKLTELGFE ASKADTSLFF LNKGGIIMFV LVYVDDIIVA 1140
SSTEKATTAL LKDLNKEFTL KDLGDLHYFL GIEVTKVSNG VILTQEKYAN DMLKRVNMSN 1200
CKPVSTPLSV SEKLTLYEGS PLGPNDATQY RSIVGALQYL TLTRPDIAYS VNKVCQFLHA 1260
PTTSHWIAVK RILRYLNQCT SLGLHVHKSA STLVHGYSDA DGAGSIDDRK STGGFAVFLG 1320
SNLVSWSARK QPTVSRSSTE AEYKAVANTT AELIWVQTVL KELGIESPKA AKIWCDNLGA 1380
KYLSANPVFH AKTKHIHVDY HFVRERVSQK LLEIDFVPSG DQVADGFTKA LSARLLENFK 1440
HNLNLTRL 1448 
Gene Ontology
GO:0003676; F: nucleic acid binding; IEA: InterPro
GO:0008270; F: zinc ion binding; IEA: InterPro
GO:0015074; P: DNA integration; IEA: InterPro 
Interpro
InterPro; IPR025724; GAG-pre-integrase_dom
InterPro; IPR001584; Integrase_cat-core
InterPro; IPR012337; RNaseH-like_dom
InterPro; IPR013103; RVT_2
InterPro; IPR029472; UBN2_3
InterPro; IPR001878; Znf_CCHC
Pfam
Pfam; PF13976; gag_pre-integrs
Pfam; PF00665; rve
Pfam; PF07727; RVT_2
Pfam; PF14244; UBN2_3 
SMART
SMART; SM00343; ZnF_C2HC 
PROSITE
PS50994; INTEGRASE 
PRINTS